146 c1ynuA_ Probab=99.68   E-value=1.5e-12  Score=103.71  Aligned_columns=316  Identities=13%

Q ss_pred             HHHHHHHHHHHCCC-----CEEEEECCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHC-CCEEEEEECCCCCCC
Q ss_conf             99999999982988-----329984571089999999853899899992713489999999857-986999417747444
Q batch____       169 KDAQKFAAKVFHAD-----KTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQA-GATPVYLEASRNPFG  242 (711)
Q Consensus       169 ~eAq~laA~~ygA~-----~t~FlvNGST~gn~a~i~a~~~~Gd~VLv~RN~HKSV~~gALiLs-ga~Pvyl~P~~~~~g  242 (711)
                      +..-+...+.||..     .-.++++|+|.++..++.+.+++||+|+|+.-++-+... ++.+. |++++++....+..+
T Consensus        83 ~aia~~l~~~~~~~~~~~~e~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~-~~~~~~g~~~v~v~~~~~~~~  161 (417)
T c1ynuA_          83 KAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDR-DLKWRTGVEIVPIHCTSSNGF  161 (417)
T ss_dssp             HHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHH-HTTTTTCCEEEEECCCGGGTT
T ss_pred             HHHHHHHHHHCCCCCCCCHHHEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH-HHHHHCCCEEEEEECCCCCCC
T ss_conf             9999999986089998885567880888999999999853789889985897278899-999818984999743842244


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHCHHHHHCCCCCCCEEEEECC-CHHHHHHH---HHHHHHHHHHCCCEEEEECCCCHHCCC
Q ss_conf             33677700079999999988471133103457627999888-71622775---999999998609839998886111025
Q batch____       243 FIGGIDAHCFNEEYLRQQIRDVAPEKADLPRPYRLAIIQLG-TYDGTVYN---ARQVIDTVGHLCDYILFDSAWVGYEQF  318 (711)
Q Consensus       243 ~ig~i~~~~it~e~i~~~l~~~p~~ka~~~~~~~~vvlTsP-TY~Gv~~D---i~~I~~~~h~~~~~lLVDEAHGAH~~F  318 (711)
                      .+        +++.+++++.+......    +++++++++| +--|.++.   +++|++.|+++++.|++||+| +++.|
T Consensus       162 ~~--------d~~~l~~~l~~~~~~~~----~~~~i~~~~p~NPtG~~~~~~~l~~l~~~a~~~~~~iI~De~y-~~l~~  228 (417)
T c1ynuA_         162 QI--------TETALEEAYQEAEKRNL----RVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIY-SGTAF  228 (417)
T ss_dssp             CC--------CHHHHHHHHHHHHHTTC----CEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTT-GGGCC
T ss_pred             CC--------CHHHHHHHHHHHHHCCC----CEEEEEECCCCCCCCEEECHHHHHHHHHHHHHCCCEEEEECCC-CCHHC
T ss_conf             66--------98899999974332169----8089994257888414325999999999987559189996787-20002


Q ss_pred             CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC-CCCHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf             73565676321002866674599861110023-54701034631776444311479899999999864788038999999
Q batch____       319 IPMMADSSPLLLELNENDPGIFVTQSVHKQQA-GFSQTSQIHKKDNHIRGQARFCPHKRLNNAFMLHASTSPFYPLFAAL  397 (711)
Q Consensus       319 hp~~~~~p~~al~~gAD~~~ilvvqS~HKtLp-aLTQtS~LHv~~~~~~~~~~~vd~~rl~~al~~~qSTSPSYlLmASL  397 (711)
                      ..-......+.+........++++.|..|+++ +=-...++...++.+        .+.+.........++++...+++.
T Consensus       229 ~~~~~~s~~~~~~~~~~~~~~i~i~S~SK~~~~~G~RiG~i~~~~~~i--------~~~~~~~~~~~~~~~~~~~~~~~~  300 (417)
T c1ynuA_         229 SSPSFISVMEVLKDSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMV--------VAAATKMSSFGLVSSQTQHLLSAM  300 (417)
T ss_dssp             SSSCCCCHHHHTTCCCGGGGEEEEEESSSSSCCGGGCEEEEEESCHHH--------HHHHHHHHTTSCCCHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHCCCCCCCEEEEECCHHHHCCCHHHHEEEEECHHHH--------HHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf             887778846643115668988999406055203403212687486899--------999998731036888899999985


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99999986110699999999999999999973002111354322354422234310002222322345433333333455
Q batch____       398 DVNAKIHEGESGRRLWAECVEIGIEARKAILARCKLFRPFIPPVVDGKLWQDYPTSVLASDRRFFSFEPGAKWHGFEGYA  477 (711)
Q Consensus       398 D~Ar~~l~~e~G~~l~~~~i~~~~~fR~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~~~  477 (711)
                      -....+.... -+++.....+....+.+.+.+..-.+....                                       
T Consensus       301 l~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~g~~~~~p~---------------------------------------  340 (417)
T c1ynuA_         301 LSDKKLTKNY-IAENHKRLKQRQKKLVSGLQKSGISCLNGN---------------------------------------  340 (417)
T ss_dssp             TTCHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTTCEECCCC---------------------------------------
T ss_pred             HCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCEEECCC---------------------------------------
T ss_conf             2261048999-999999989999999999762798894688---------------------------------------


Q ss_pred             CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHH-HHCCCEEE------ECCCCEEEEEECCCCCHHHHHHHHHH
Q ss_conf             774222770699982576666543220288999999999-98296866------35897699996588799999999999
Q batch____       478 ADQYFVDPCKLLLTTPGIDAETGEYSDFGVPATILAHYL-RENGIVPE------KCDLNSILFLLTPAESHEKLAQLVAM  550 (711)
Q Consensus       478 ~~~~~~DP~Ki~I~t~g~~~~~~~~~~~Gi~G~~l~~~L-~e~gI~~E------~ad~~~vL~l~s~g~t~~d~~~L~~a  550 (711)
                            --.=+.+..+............     ++.+.| +++||.+-      ..++.++=+-++ ..+++.+..-++-
T Consensus       341 ------~g~~~~i~l~~~~~~~~~~~~~-----~~~~~ll~e~gV~v~pg~~f~~~~~g~iRis~a-~~~~~~l~~al~r  408 (417)
T c1ynuA_         341 ------AGLFCWVDMRHLLRSNTFEAEM-----ELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFA-NLPERTLDLAMQR  408 (417)
T ss_dssp             ------SSSEEEEECGGGCSSSSHHHHH-----HHHHHHHHTTCEECEETTTTTCSSTTEEEEECS-SSCHHHHHHHHHH
T ss_pred             ------CCEEEEEECCCCCCCCCCCCHH-----HHHHHHHHHCCEEEEECHHHCCCCCCEEEEECC-CCCHHHHHHHHHH
T ss_conf             ------6128998775324654445789-----999999997596998072208789877999746-8999999999999


Q ss_pred             HHHHHHHH
Q ss_conf             99998751
Q batch____       551 LAQFEQHI  558 (711)
Q Consensus       551 L~~i~~~~  558 (711)
                      |.++-+++
T Consensus       409 l~~~l~e~  416 (417)
T c1ynuA_         409 LKAFVGEY  416 (417)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHCC
T ss_conf             99973100