Job Description P0AB77 Confidence 99.89% Date Thu Jan 5 11:14:48 GMT 2012 Rank 229 Aligned Residues 305 % Identity 11% Template d2hoxa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.40

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100									.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Query Sequence		A	A	K	A	G	M	D	S	H	G	F	G	M	A	S	V	R	F	I	C	G	T	Q	D	S	H	K	E	L	E	Q	K	L	A	A	F	L	.	.	.	.	.	.	.	.	G	M	E	D	A	I	L	Y	S	S	C	F	D	A	N	G	G	L	F	E	T	L	L	G	A	E	D	A	.	.	.	.	.	.	.
Query Conservation																																							.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	A	S	A	V	L	V	S	P	W	H	R	M	S	Y	F	F	N	P	V	S	N	F	I	S	F	E	L	E	K	T	I	K	E	L	H	E	V	V	G	N	A	A	A	K	D	R	Y	I	V	F	G	V	G	V	T	Q	L	I	H	G	L	V	I	S	L	S	P	N	M	T	A	T	P	D	A	P	E	S
Template Known Secondary structure											T	T	T	T		S	S	S		S	S			T	T																	T		B			T	T							S														S			T	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
			129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	I	I	S	D	A	L	N	H	A	S	I	I	D	G	V	R	L	C	K	A	K	R	Y	R	Y	A	N	N	D	M	Q	E	L	E	A	R	L	K	E	A	R	E	A	G	A	R	H	V	L	I	A	T	D	G	V	F	S	M	D	G	V	I	A	N	L	K	G	V	C	D	L	A	D	K	Y	D	A	L	V
Query Conservation		.
Alig confidence		.																											.													.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation																													.													.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Sequence		K	V	V	A	H	A	P	F	Y	P	V	F	R	E	Q	T	K	Y	F	D	K	K	G	Y	V	W	A	.	G	N	A	A	N	Y	V	N	V	S	N	P	.	.	.	.	.	.	E	Q	Y	I	E	M	V	T	S	P	N	N	P	E	G	L	L	R	H	.	.	.	.	.	.	.	A	V	I	K	G	C	K	S
Template Known Secondary structure							S	S												S			T	T					.			G	G	G	G	T	T		S		G	.	.	.	.	.	.	G	G							S	S		T	T	T						.	.	.	.	.	.	.		S	S	T	T
Template Predicted Secondary structure																													.													.	.	.	.	.	.																				.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.							.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.								.	.	.	.	.	220	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		M	V	D	D	S	H	A	V	G	F	V	G	E	N	G	R	G	S	H	E	Y	C	D	V	M	G	R	V	D	I	I	T	G	T	L	G	K	A	L	G	G	A	S	G	G	Y	.	T	A	A	R	K	E	V	V	E	W	L	R	Q	R	S	R	P	Y	L	F	S	N	S	L	A	P	A	I	V	A	A	S	I
Query Conservation																																																.
Alig confidence																				.	.	.	.	.	.																							.
Template Conservation																				.	.	.	.	.	.
Template Sequence		I	Y	D	M	V	Y	Y	W	P	H	Y	T	P	I	K	Y	K	A	.	.	.	.	.	.	D	E	D	I	L	L	F	T	M	S	K	F	T	G	H	S	G	S	R	F	G	W	A	L	I	K	D	E	S	V	Y	N	N	L	L	N	Y	M	T	K	N	T	E	G	T	P	R	E	T	Q	L	R	S	L	K	V
Template Known Secondary structure						T	T		S	T	T	T	S				S		B	.	.	.	.	.	.			S										T	S		G	G	G																								T	S	S
Template Predicted Secondary structure																				.	.	.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240							.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		287	.	.											290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.																	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	L	.	.	.	.	.	.	.	.	.	.	E	M	V	E	A	G	S	E	L	R	D	R	L	W	A	N	A	R	Q	F	R	E	Q	M	S	A	A	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	A	G	A	D	H	A	I	I	P	V	M	L	G	D	A	V	V	A	Q	K
Query Conservation					.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																																																																													.
Template Sequence		L	K	E	V	V	A	M	V	K	T	Q	K	G	T	M	R	D	L	N	T	F	G	F	K	K	L	R	E	R	W	V	N	I	T	A	L	L	D	Q	S	D	R	F	S	Y	Q	E	L	P	Q	S	E	Y	C	N	Y	F	R	R	M	R	P	P	S	P	S	Y	A	W	V	K	C	E	W	E	.	E	D	K	D
Template Known Secondary structure													T	T	S	T	T	S																					T	T	S	S	S								S					T	T	T	T								S								S	G	.	G	G		S
Template Predicted Secondary structure																																																																													.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.		.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	R	E	L	Q	K	E	G	I	Y	V	T	G	F	F	Y	P	V	V	P	K	G	Q	A	R	I	R	T	Q	M	S	A	A	H	T	P	E	Q	I	T	R	A	V	E	A	F	T	R	I	G	K	Q
Query Conservation
Alig confidence																				.	.											.	.
Template Conservation																				.	.											.	.
Template Sequence		C	Y	Q	T	F	Q	N	G	R	I	N	T	Q	N	G	V	G	F	.	.	E	A	S	S	R	Y	V	R	L	S	.	.	L	I	K	T	Q	D	D	F	D	Q	L	M	Y	Y	L	K	D	M	V	K	A
Template Known Secondary structure									T	T						G	G	G	G	.	.	T	S		T	T						.	.		S	S																	T
Template Predicted Secondary structure																				.	.											.	.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.			.	.	.	.	.	.	400	.	.	.			.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions