Job Description P0A991 Confidence 52.81% Date Thu Jan 5 11:09:38 GMT 2012 Rank 387 Aligned Residues 135 % Identity 16% Template c1tufA_ PDB info PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure of diaminopimelate decarboxylase from m.2 jannaschi Resolution 2.40 Å

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		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.																.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																		.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	K	N	I	V	E	L	A	I	E	A	G	C	N	C	V	.	.	.	.	A	S	T	Y	G	V	L	A	S	V	S	R	R	Y	A	H	R	I	P	F	L	V	K	L	N	H	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	L	S	Y	P	N	T	Y	D	Q	T	L	Y	A	S	V	E
Query Conservation																		.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.
Template Conservation																																																																			.
Template Sequence		T	K	E	E	I	I	M	G	I	E	A	N	I	R	A	F	N	V	D	S	I	S	E	L	I	L	I	N	E	T	A	K	E	L	G	E	T	A	N	V	A	F	R	I	N	P	N	V	N	P	K	T	H	P	K	I	S	T	G	L	K	K	N	K	F	.	G	L	D	V	E	S	G	I	A	M	K	A	I	K
Template Known Secondary structure												T	T		S																					T								B							T	T	T	S										S	S		.	S			T	T	T	T
Template Predicted Secondary structure																																																																			.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.
		155	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.						.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure							.																	.	.	.	.	.
Query SS confidence							.																	.	.	.	.	.
Query Sequence		Q	A	F	N	M	.	G	A	V	A	V	G	A	T	I	Y	F	G	S	E	E	S	.	.	.	.	.	R	R	Q	I	E	E	I	S	A	A	F	E	R	A	H	E	L	G	M	V	T	V	L	W	A	Y	L	R	N	S	A	F	K	K	D	G	V	D	Y	H	V	S	A	D	L	T	G	Q	A	N	H	L	A
Query Conservation							.																	.	.	.	.	.
Alig confidence							.																	.	.	.	.	.																											.	.
Template Conservation																																																							.	.
Template Sequence		M	A	L	E	M	E	Y	V	N	V	V	G	V	H	C	H	I	G	S	Q	L	T	D	I	S	P	F	I	E	E	T	R	K	V	M	D	F	V	V	E	L	K	E	E	G	I	E	I	E	D	V	N	L	.	.	G	G	G	L	G	I	P	Y	Y	K	D	K	Q	I	P	T	Q	K	D	L	A	D	A	I	I
Template Known Secondary structure					T		S	S												S	S	B																						T	T	T				S					.	.				B					S	S	S	S
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		229	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	T	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		287	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions