387 c1tufA_ Probab=52.81   E-value=18  Score=17.00  Aligned_columns=135  Identities=16%

Q ss_pred             HHHHHHHHHHCCCCEE----EHHHHHHHHHHHCCCCCCCEEEEEECC---------------CCCCCCCCCCHHEECCHH
Q ss_conf             6999999971375656----000015642100025546449996057---------------846788877001433589
Q batch____        94 PKNIVELAIEAGCNCV----ASTYGVLASVSRRYAHRIPFLVKLNHN---------------ETLSYPNTYDQTLYASVE  154 (350)
Q Consensus        94 p~~~i~~aieaG~na~----l~~~Gm~~~~~~~y~~~i~lIvkln~~---------------tsL~~p~~~~k~Lv~SVE  154 (350)
                      ...-+++|++.|+..+    ..+.-.+...++..+..+...+|+|.+               +.+ +=.+......--++
T Consensus       115 ~~~~l~~a~~~g~~~i~iDs~~el~~l~~~a~~~~~~~~v~iRvn~~~~~~~~~~~~tg~~~srf-Gi~~~~~~~~~~i~  193 (433)
T c1tufA_         115 TKEEIIMGIEANIRAFNVDSISELILINETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKF-GLDVESGIAMKAIK  193 (433)
T ss_dssp             CHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHHTCCEEEEEBEECCCCTTTSHHHHHHHHHSSC-SEETTTTHHHHHHH
T ss_pred             CHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHH
T ss_conf             99999999987983999889899999999988549974799997068987752111468876620-14288878999999


Q ss_pred             HHHHC-CCCEEEEEEEECCCCH-----HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             99634-8758999986378326-----99999999999999873994899981267666755563323489999999989
Q batch____       155 QAFNM-GAVAVGATIYFGSEES-----RRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLA  228 (350)
Q Consensus       155 eAvRL-GADAVsv~vy~GSe~E-----~~mL~dlg~Vaeea~~~GmPlia~~YPRG~~i~~~~~d~e~dpdlia~AaRiA  228 (350)
                      ++.++ |-.=.++|.++||...     .++++.+.++.++..+.|.++=..-.  |..+.-++......+++-.|+..+.
T Consensus       194 ~~~~~~~l~l~Glh~H~gs~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~ini--GGG~~~~~~~~~~~~~~~~~~~~i~  271 (433)
T c1tufA_         194 MALEMEYVNVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEEGIEIEDVNL--GGGLGIPYYKDKQIPTQKDLADAII  271 (433)
T ss_dssp             HHHTCSSEEECEEECCCCSSBCCHHHHHHHHHHHHHHHHHHHTTTCCCSEEEC--CCCBCCCCSSSSCCCCHHHHHHHHH
T ss_pred             HHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE--CCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             99726997099999633898989899999999999999999861799729981--6887867677766889999999999


Q ss_pred             HHH
Q ss_conf             874
Q batch____       229 ATI  231 (350)
Q Consensus       229 aEL  231 (350)
                      ..+
T Consensus       272 ~~l  274 (433)
T c1tufA_         272 NTM  274 (433)
T ss_dssp             HHH
T ss_pred             HHH
T ss_conf             999