Email l.a.kelley@imperial.ac.uk Description P0A729 Date Thu Jan 5 11:04:38 GMT 2012 Unique Job ID 1d84a1a5ffb3cbbd

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1ex2a_ 100.0 35 Fold:Anticodon-binding domain-like Superfamily:ITPase-like Family:Maf-like 2 d2amha1 100.0 19 Fold:Anticodon-binding domain-like Superfamily:ITPase-like Family:Maf-like 3 c2p5xB_ 100.0 29 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:n-acetylserotonin o-methyltransferase-like protein; PDBTitle: crystal structure of maf domain of human n-acetylserotonin o-2 methyltransferase-like protein 4 d1k7ka_ 97.2 17 Fold:Anticodon-binding domain-like Superfamily:ITPase-like Family:ITPase (Ham1) 5 d2cara1 96.6 13 Fold:Anticodon-binding domain-like Superfamily:ITPase-like Family:ITPase (Ham1) 6 d1v7ra_ 96.5 16 Fold:Anticodon-binding domain-like Superfamily:ITPase-like Family:ITPase (Ham1) 7 d1vp2a_ 95.7 15 Fold:Anticodon-binding domain-like Superfamily:ITPase-like Family:ITPase (Ham1) 8 c3tquD_ 93.7 18 PDB header:hydrolase Chain: D: PDB Molecule:non-canonical purine ntp pyrophosphatase; PDBTitle: structure of a ham1 protein from coxiella burnetii 9 d1b78a_ 92.6 17 Fold:Anticodon-binding domain-like Superfamily:ITPase-like Family:ITPase (Ham1) 10 d1pdaa1 52.2 17 Fold:Periplasmic binding protein-like II Superfamily:Periplasmic binding protein-like II Family:Phosphate binding protein-like 11 c2ypnA_ 50.0 17 PDB header:transferase Chain: A: PDB Molecule:protein (hydroxymethylbilane synthase); PDBTitle: hydroxymethylbilane synthase 12 c3eq1A_ 47.6 21 PDB header:transferase Chain: A: PDB Molecule:porphobilinogen deaminase; PDBTitle: the crystal structure of human porphobilinogen deaminase at2 2.8a resolution 13 c2db5A_ 39.2 14 PDB header:protein binding Chain: A: PDB Molecule:inad-like protein; PDBTitle: solution structure of the first pdz domain of inad-like2 protein 14 d1pyya1 37.1 24 Fold:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Superfamily:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Family:Penicillin-binding protein 2x (pbp-2x), c-terminal domain 15 d1k25a1 34.8 24 Fold:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Superfamily:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Family:Penicillin-binding protein 2x (pbp-2x), c-terminal domain 16 c2o2tB_ 34.6 22 PDB header:structural protein Chain: B: PDB Molecule:multiple pdz domain protein; PDBTitle: the crystal structure of the 1st pdz domain of mpdz 17 c3jr2D_ 28.0 10 PDB header:biosynthetic protein Chain: D: PDB Molecule:hexulose-6-phosphate synthase sgbh; PDBTitle: x-ray crystal structure of the mg-bound 3-keto-l-gulonate-6-phosphate2 decarboxylase from vibrio cholerae o1 biovar el tor str. n16961 18 c2e7kA_ 27.8 24 PDB header:membrane protein Chain: A: PDB Molecule:maguk p55 subfamily member 2; PDBTitle: solution structure of the pdz domain from human maguk p552 subfamily member 2 19 d1pyya2 25.7 5 Fold:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Superfamily:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Family:Penicillin-binding protein 2x (pbp-2x), c-terminal domain 20 d1rp5a2 24.2 5 Fold:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Superfamily:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Family:Penicillin-binding protein 2x (pbp-2x), c-terminal domain 21 d1gh9a_ not modelled 24.0 30 Fold:Rubredoxin-like Superfamily:Hypothetical protein MTH1184 Family:Hypothetical protein MTH1184 22 c3eggC_ not modelled 24.0 22 PDB header:hydrolase Chain: C: PDB Molecule:spinophilin; PDBTitle: crystal structure of a complex between protein phosphatase 1 alpha2 (pp1) and the pp1 binding and pdz domains of spinophilin 23 d1e94a_ not modelled 23.7 19 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 24 d1k25a2 not modelled 23.0 5 Fold:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Superfamily:Penicillin-binding protein 2x (pbp-2x), c-terminal domain Family:Penicillin-binding protein 2x (pbp-2x), c-terminal domain 25 d1u5wa1 not modelled 22.9 14 Fold:Anticodon-binding domain-like Superfamily:ITPase-like Family:YjjX-like 26 d1v8aa_ not modelled 18.9 11 Fold:Ribokinase-like Superfamily:Ribokinase-like Family:Thiamin biosynthesis kinases 27 c1tuoA_ not modelled 18.2 10 PDB header:biosynthetic protein Chain: A: PDB Molecule:putative phosphomannomutase; PDBTitle: crystal structure of putative phosphomannomutase from2 thermus thermophilus hb8 28 d1wh1a_ not modelled 17.7 16 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 29 d1g3ka_ not modelled 17.6 15 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 30 d1ujva_ not modelled 15.7 12 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 31 c1t6zB_ not modelled 15.7 22 PDB header:transferase Chain: B: PDB Molecule:riboflavin kinase/fmn adenylyltransferase; PDBTitle: crystal structure of riboflavin bound tm379 32 c3op1A_ not modelled 15.0 8 PDB header:transferase Chain: A: PDB Molecule:macrolide-efflux protein; PDBTitle: crystal structure of macrolide-efflux protein sp_1110 from2 streptococcus pneumoniae 33 d1v6ba_ not modelled 14.9 18 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 34 c3a11D_ not modelled 14.1 16 PDB header:isomerase Chain: D: PDB Molecule:translation initiation factor eif-2b, delta PDBTitle: crystal structure of ribose-1,5-bisphosphate isomerase from2 thermococcus kodakaraensis kod1 35 d1y0ua_ not modelled 14.1 47 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:ArsR-like transcriptional regulators 36 c3ouvA_ not modelled 14.0 10 PDB header:transferase Chain: A: PDB Molecule:serine/threonine protein kinase; PDBTitle: semet derivative of l512m mutant of pasta domain 3 of mycobacterium2 tuberculosis pknb 37 d2z3ba1 not modelled 14.0 7 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 38 c1nl3B_ not modelled 13.4 13 PDB header:protein transport Chain: B: PDB Molecule:preprotein translocase seca 1 subunit; PDBTitle: crystal structure of the seca protein translocation atpase2 from mycobacterium tuberculosis in apo form 39 c2x0kB_ not modelled 13.0 28 PDB header:transferase Chain: B: PDB Molecule:riboflavin biosynthesis protein ribf; PDBTitle: crystal structure of modular fad synthetase from2 corynebacterium ammoniagenes 40 d2eyqa2 not modelled 12.6 25 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Tandem AAA-ATPase domain 41 d1m4ya_ not modelled 12.1 11 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Proteasome subunits 42 c3juxA_ not modelled 12.0 13 PDB header:protein transport Chain: A: PDB Molecule:protein translocase subunit seca; PDBTitle: structure of the translocation atpase seca from thermotoga2 maritima 43 c3pvsA_ not modelled 11.5 18 PDB header:recombination Chain: A: PDB Molecule:replication-associated recombination protein a; PDBTitle: structure and biochemical activities of escherichia coli mgsa 44 d1sknp_ not modelled 11.5 25 Fold:A DNA-binding domain in eukaryotic transcription factors Superfamily:A DNA-binding domain in eukaryotic transcription factors Family:A DNA-binding domain in eukaryotic transcription factors 45 d1vaea_ not modelled 11.2 21 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 46 d1jgta2 not modelled 10.7 32 Fold:Ntn hydrolase-like Superfamily:N-terminal nucleophile aminohydrolases (Ntn hydrolases) Family:Class II glutamine amidotransferases 47 d2b8na1 not modelled 10.6 16 Fold:GckA/TtuD-like Superfamily:GckA/TtuD-like Family:GckA/TtuD-like 48 c2qjoB_ not modelled 10.1 14 PDB header:transferase, hydrolase Chain: B: PDB Molecule:bifunctional nmn adenylyltransferase/nudix hydrolase; PDBTitle: crystal structure of a bifunctional nmn adenylyltransferase/adp ribose2 pyrophosphatase (nadm) complexed with adprp and nad from3 synechocystis sp. 49 c2du4B_ not modelled 10.1 37 PDB header:ligase/rna Chain: B: PDB Molecule:o-phosphoseryl-trna synthetase; PDBTitle: crystal structure of archaeoglobus fulgidus o-phosphoseryl-2 trna synthetase complexed with trnacys 50 c2pnyA_ not modelled 9.9 24 PDB header:isomerase Chain: A: PDB Molecule:isopentenyl-diphosphate delta-isomerase 2; PDBTitle: structure of human isopentenyl-diphosphate delta-isomerase 2 51 d1gpua2 not modelled 9.7 9 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:TK-like Pyr module 52 c2kz5A_ not modelled 9.7 25 PDB header:transcription Chain: A: PDB Molecule:transcription factor nf-e2 45 kda subunit; PDBTitle: solution nmr structure of transcription factor nf-e2 subunit's dna2 binding domain from homo sapiens, northeast structural genomics3 consortium target hr4653b 53 c3diwB_ not modelled 9.4 26 PDB header:signaling protein/cell adhesion Chain: B: PDB Molecule:tax1-binding protein 3; PDBTitle: c-terminal beta-catenin bound tip-1 structure 54 d1x4pa1 not modelled 9.2 39 Fold:Surp module (SWAP domain) Superfamily:Surp module (SWAP domain) Family:Surp module (SWAP domain) 55 d1ujda_ not modelled 8.9 21 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 56 d1t1va_ not modelled 8.8 24 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:SH3BGR (SH3-binding, glutamic acid-rich protein-like) 57 c3b76A_ not modelled 8.7 23 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase lnx; PDBTitle: crystal structure of the third pdz domain of human ligand-of-numb2 protein-x (lnx1) in complex with the c-terminal peptide from the3 coxsackievirus and adenovirus receptor 58 d1i16a_ not modelled 8.5 24 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:Interleukin 16 59 d1zwya1 not modelled 8.3 16 Fold:Anticodon-binding domain-like Superfamily:ITPase-like Family:YjjX-like 60 c3dzvB_ not modelled 8.2 13 PDB header:transferase Chain: B: PDB Molecule:4-methyl-5-(beta-hydroxyethyl)thiazole kinase; PDBTitle: crystal structure of 4-methyl-5-(beta-hydroxyethyl)thiazole2 kinase (np_816404.1) from enterococcus faecalis v583 at3 2.57 a resolution 61 d1kwma2 not modelled 8.1 5 Fold:Ferredoxin-like Superfamily:Protease propeptides/inhibitors Family:Pancreatic carboxypeptidase, activation domain 62 d1q7xa_ not modelled 8.1 27 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 63 d2fi0a1 not modelled 8.0 28 Fold:SP0561-like Superfamily:SP0561-like Family:SP0561-like 64 d2boaa2 not modelled 8.0 5 Fold:Ferredoxin-like Superfamily:Protease propeptides/inhibitors Family:Pancreatic carboxypeptidase, activation domain 65 c2ktaA_ not modelled 8.0 22 PDB header:hydrolase Chain: A: PDB Molecule:putative helicase; PDBTitle: solution nmr structure of a domain of protein a6ky75 from bacteroides2 vulgatus, northeast structural genomics target bvr106a 66 d1ayea2 not modelled 7.8 20 Fold:Ferredoxin-like Superfamily:Protease propeptides/inhibitors Family:Pancreatic carboxypeptidase, activation domain 67 d1fmfa_ not modelled 7.8 9 Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain 68 c1m1zB_ not modelled 7.8 43 PDB header:hydrolase Chain: B: PDB Molecule:beta-lactam synthetase; PDBTitle: beta-lactam synthetase apo enzyme 69 c1u37A_ not modelled 7.7 11 PDB header:protein transport Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding, PDBTitle: auto-inhibition mechanism of x11s/mints family scaffold2 proteins revealed by the closed conformation of the tandem3 pdz domains 70 c2xi1A_ not modelled 7.7 22 PDB header:viral protein Chain: A: PDB Molecule:nef; PDBTitle: crystal structure of the hiv-1 nef sequenced from a patient's sample 71 d1p5dx2 not modelled 7.4 16 Fold:Phosphoglucomutase, first 3 domains Superfamily:Phosphoglucomutase, first 3 domains Family:Phosphoglucomutase, first 3 domains 72 d1whda_ not modelled 7.2 12 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 73 c3hrdC_ not modelled 7.2 22 PDB header:oxidoreductase Chain: C: PDB Molecule:nicotinate dehydrogenase fad-subunit; PDBTitle: crystal structure of nicotinate dehydrogenase 74 d1pyta_ not modelled 7.1 20 Fold:Ferredoxin-like Superfamily:Protease propeptides/inhibitors Family:Pancreatic carboxypeptidase, activation domain 75 c2ehrA_ not modelled 7.1 15 PDB header:structural protein Chain: A: PDB Molecule:inad-like protein; PDBTitle: solution structure of the sixth pdz domain of human inad-2 like protein 76 c3e7lD_ not modelled 7.1 16 PDB header:transcription regulator Chain: D: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain 77 d1mfga_ not modelled 7.1 18 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 78 c3k2tA_ not modelled 7.1 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lmo2511 protein; PDBTitle: crystal structure of lmo2511 protein from listeria2 monocytogenes, northeast structural genomics consortium3 target lkr84a 79 d1ozia_ not modelled 7.0 27 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 80 d1nsaa2 not modelled 7.0 15 Fold:Ferredoxin-like Superfamily:Protease propeptides/inhibitors Family:Pancreatic carboxypeptidase, activation domain 81 d2h3la1 not modelled 7.0 18 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 82 c1u38A_ not modelled 6.9 11 PDB header:protein transport Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding, PDBTitle: auto-inhibition mechanism of x11s/mints family scaffold2 proteins revealed by the closed conformation of the tandem3 pdz domains 83 d1nfpa_ not modelled 6.9 12 Fold:TIM beta/alpha-barrel Superfamily:Bacterial luciferase-like Family:Non-fluorescent flavoprotein (luxF, FP390) 84 c2edpA_ not modelled 6.8 9 PDB header:structural protein Chain: A: PDB Molecule:shroom family member 4; PDBTitle: solution structure of the pdz domain from human shroom2 family member 4 85 d2dlda2 not modelled 6.8 11 Fold:Flavodoxin-like Superfamily:Formate/glycerate dehydrogenase catalytic domain-like Family:Formate/glycerate dehydrogenases, substrate-binding domain 86 c3cyyA_ not modelled 6.7 17 PDB header:peptide binding protein Chain: A: PDB Molecule:tight junction protein zo-1; PDBTitle: the crystal structure of zo-1 pdz2 in complex with the cx43 peptide 87 d1f2ea2 not modelled 6.6 14 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione S-transferase (GST), N-terminal domain 88 c2eq9C_ not modelled 6.5 22 PDB header:oxidoreductase Chain: C: PDB Molecule:pyruvate dehydrogenase complex, dihydrolipoamide PDBTitle: crystal structure of lipoamide dehydrogenase from thermus thermophilus2 hb8 with psbdb 89 d1pcaa1 not modelled 6.4 20 Fold:Ferredoxin-like Superfamily:Protease propeptides/inhibitors Family:Pancreatic carboxypeptidase, activation domain 90 c2dluA_ not modelled 6.4 18 PDB header:protein binding Chain: A: PDB Molecule:inad-like protein; PDBTitle: solution structure of the second pdz domain of human inad-2 like protein 91 c2ragB_ not modelled 6.3 21 PDB header:hydrolase Chain: B: PDB Molecule:dipeptidase; PDBTitle: crystal structure of aminohydrolase from caulobacter crescentus 92 d1um7a_ not modelled 6.2 27 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 93 c2eq7C_ not modelled 6.2 14 PDB header:oxidoreductase Chain: C: PDB Molecule:2-oxoglutarate dehydrogenase e2 component; PDBTitle: crystal structure of lipoamide dehydrogenase from thermus thermophilus2 hb8 with psbdo 94 d1u3ba2 not modelled 6.2 19 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 95 c3gkxB_ not modelled 6.2 19 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative arsc family related protein; PDBTitle: crystal structure of putative arsc family related protein from2 bacteroides fragilis 96 d1ueqa_ not modelled 6.2 12 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 97 c3sbxC_ not modelled 6.1 19 PDB header:unknown function Chain: C: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of a putative uncharacterized protein from2 mycobacterium marinum bound to adenosine 5'-monophosphate amp 98 c2klxA_ not modelled 6.0 21 PDB header:oxidoreductase Chain: A: PDB Molecule:glutaredoxin; PDBTitle: solution structure of glutaredoxin from bartonella henselae str.2 houston 99 d1ojra_ not modelled 6.0 24 Fold:AraD/HMP-PK domain-like Superfamily:AraD/HMP-PK domain-like Family:AraD-like aldolase/epimerase