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Job DescriptionP11988
Confidence99.62%DateThu Jan 5 11:33:02 GMT 2012
Rank92Aligned Residues268
% Identity15%Templatec3civA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:endo-beta-1,4-mannanase; PDBTitle: crystal structure of the endo-beta-1,4-mannanase from2 alicyclobacillus acidocaldarius
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   65....70.........80.........90......... 100.........110.........120.........130.........140.
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Query Sequence  YPEDIALFAEMGFTCLRISIAWARIFPQGDEVEPN. . . EAGLAFYDRLFDEMAQAGIKPLVTLSHYEMPYGLVKNYGGWA
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Template Sequence  ARASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCLKPTVNCRDGTWRGEIRFEK
Template Known Secondary structure  SS
SSSTT



B
STTTB

TT
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GGG


SB
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   32.......40.........50.........60.........70.........80.........90.........100.........110.
 
   142. ......150.........160.........170.........180.........190.........200.........210
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Query Sequence  NR. . . . . . . . . . . AVIDHFEHYARTVFTRYQHKVALWLTFNEINMSLHAPFTGVGLAEESGEAEVYQAIHHQLVASARAV
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Template Sequence  EHGPDLESWEAWFGSYSDMMAHYAHVAKRTG. . CEMFCVGCEMTTAEP. . . . . . . . . . . . . . . . . . . . . . . HEAMWRETI
Template Known Secondary structure  S

TTSSBTT..
SS
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   112.......120.........130.........140.. .......150....... ..160......
 
   211........220.........230.........240.........250.........260.........270.........280.........290
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Query Sequence  KACHSLLPEAKIGNMLLGGLVYPLTCQPQDMLQAMEENRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKH
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Template Sequence  ARVRTEYDGLVTYNCNHGREEHVRFWDA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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STT
TTT
S
GGG....................................................
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   167..170.........180.........190....
 
   291........300.........310.........320.........330.........340.........350.........360.........370
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Query Sequence  TVDFISFSYYMTGCVSHDESINKNAQGNILNMIPNPHLKSSEWGWQIDPVGLRVLLNTLWDRYQKPLFIVENGLGAKDSV
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Template Sequence  . VDLISSSAY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YPIDRWRDRVPVLREVAEAHEKPLFFMEVGCPSRSGS
Template Known Secondary structure  .SS

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GGGT




SBTTG
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   195....200... ......210.........220.........230.........240
 
   371........380.........390.........400.........410.........420.........430.........440.......
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Query Sequence  . . . EADGSIQDDYRIAYLNDHLVQVNEAIADGVDIMGYTSWGPIDLVSASHSQMSKRYGFIYVDRDDNGEGSLTRTRKKS
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Template Sequence  GACPWDYRHPGAVCLDEQARFYEAMFAAMPDEPWFKGYMLWEWPWKLYPREAASEDG. . . . . . . . . . . . . . SYCIYGKPA
Template Known Secondary structure  GGSTT
TT



B
S


TT
SS


GGGGGG

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TTS
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   241........250.........260.........270.........280.........290....... ..300......
 
   448.450.......
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Query Sequence  FGWYAEVIKT
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Template Sequence  EDVVARAFSA
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   307..310......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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