92 c3civA_ Probab=99.62   E-value=6.4e-13  Score=91.06  Aligned_columns=268  Identities=15%

Q ss_pred             HHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCC---HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCC
Q ss_conf             89999999980998999614202401168888879---999999999999999879889996456767368887618727
Q batch____        65 YPEDIALFAEMGFTCLRISIAWARIFPQGDEVEPN---EAGLAFYDRLFDEMAQAGIKPLVTLSHYEMPYGLVKNYGGWA  141 (470)
Q Consensus        65 y~eDi~lm~~lG~~~yRfSIsWsRI~P~g~~~~~n---~~gl~~Y~~lid~l~~~GI~PivTL~H~d~P~~L~~~~GGw~  141 (470)
                      .++|+++||++|+|+.|..+-|.-..|........   ....+.-+.+|+.+.++||.+|+++|-+..+...........
T Consensus        28 ~~~~l~~l~~~G~N~vRi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~A~~~Gl~Vil~~h~~~~~~~w~~~~~~~~  107 (316)
T c3civA_          28 ARASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCLKPTVNCRDGTWRGEIRFEK  107 (316)
T ss_dssp             HHHHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEEEEEEEETTCCCGGGCCCSB
T ss_pred             HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCC
T ss_conf             99999999983998999823247777677654447677679789999999998689879997235888876555667678


Q ss_pred             CH-----------HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             82-----------3689999999999999588775898732700443232146316888882689999999999889999
Q batch____       142 NR-----------AVIDHFEHYARTVFTRYQHKVALWLTFNEINMSLHAPFTGVGLAEESGEAEVYQAIHHQLVASARAV  210 (470)
Q Consensus       142 ~~-----------~~v~~F~~Ya~~~~~~fgdrV~~W~T~NEP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Ah~~A~  210 (470)
                      ..           +.+..|...-..+....+  +..+...||++-...                       ......+++
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~--nE~~~~gne~~~~~~-----------------------~~~~~~~~~  162 (316)
T c3civA_         108 EHGPDLESWEAWFGSYSDMMAHYAHVAKRTG--CEMFCVGCEMTTAEP-----------------------HEAMWRETI  162 (316)
T ss_dssp             SCCTTSSBHHHHHHHHHHHHHHHHHHHHHTT--CSEEEEEESCTTTTT-----------------------CHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC--CCEEECCCCCCCCHH-----------------------HHHHHHHHH
T ss_conf             6012557699999999999987999987419--985850677776001-----------------------467899999


Q ss_pred             HHHHHHCCCCEEEEEEECCEEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHCC
Q ss_conf             99997278880678862435665788820179999999872855541112668899999975078888768869987279
Q batch____       211 KACHSLLPEAKIGNMLLGGLVYPLTCQPQDMLQAMEENRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKH  290 (470)
Q Consensus       211 ~~~r~~~~~~~Vgi~~~~~~~~P~~~~~~d~~aA~~~~~~~~~~~d~l~~G~yp~~~~~~~~~~~~~~~~t~~e~~~~k~  290 (470)
                      +.+|+.+|...+.+..............                                                    
T Consensus       163 ~~ir~~dp~~~~~~~~~~~~~~~~~~~~----------------------------------------------------  190 (316)
T c3civA_         163 ARVRTEYDGLVTYNCNHGREEHVRFWDA----------------------------------------------------  190 (316)
T ss_dssp             HHHHHHCCSEEEEEEETTCTTTCSCGGG----------------------------------------------------
T ss_pred             HHHHHHCCCCEEEECCCCCCCCCCCCCC----------------------------------------------------
T ss_conf             9999746997799446886333453334----------------------------------------------------


Q ss_pred             CCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
Q ss_conf             97699982888546603787776645663234568987567778766607999999999988289899993276677778
Q batch____       291 TVDFISFSYYMTGCVSHDESINKNAQGNILNMIPNPHLKSSEWGWQIDPVGLRVLLNTLWDRYQKPLFIVENGLGAKDSV  370 (470)
Q Consensus       291 s~DflGinyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~s~~gw~i~P~gl~~~L~~~~~~Y~~Pi~ITENG~~~~d~~  370 (470)
                       +|++|+++|                                 ...-........++.+...|++||+|||.|+......
T Consensus       191 -~D~ig~~~Y---------------------------------~~~~~~~~~~~~~~~~~~~~~kPi~i~E~G~~~~~g~  236 (316)
T c3civA_         191 -VDLISSSAY---------------------------------YPIDRWRDRVPVLREVAEAHEKPLFFMEVGCPSRSGS  236 (316)
T ss_dssp             -SSEEEEECC---------------------------------CCGGGHHHHHHHHHHHHHHHTCCEEEEEECCCSBTTG
T ss_pred             -CCEEEEECC---------------------------------CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC
T ss_conf             -576763147---------------------------------7743068899986546530588579970145223577


Q ss_pred             ---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECHH
Q ss_conf             ---85564030689999999999999999859988897443003470035565112111899607789877552242239
Q batch____       371 ---EADGSIQDDYRIAYLNDHLVQVNEAIADGVDIMGYTSWGPIDLVSASHSQMSKRYGFIYVDRDDNGEGSLTRTRKKS  447 (470)
Q Consensus       371 ---~~~g~i~D~~R~~yl~~~l~~v~~Ai~dGv~v~GY~~WSl~Dn~eW~~G~y~~rfGl~~Vd~~~~~~~t~~R~pk~S  447 (470)
                         +.+-......=...-.+++.+...+..+.--+.|.++|++-++-.=..|.-...              ...+..||.
T Consensus       237 ~~~~~~~~~~~~~~~~~Qa~~~~~~~~~~~~~~~~~G~~~W~w~~~~~~~~~~~~d~--------------~f~~~~Kpa  302 (316)
T c3civA_         237 GACPWDYRHPGAVCLDEQARFYEAMFAAMPDEPWFKGYMLWEWPWKLYPREAASEDG--------------SYCIYGKPA  302 (316)
T ss_dssp             GGSTTCTTCCCCBCHHHHHHHHHHHHHHSCCCTTEEEEEEEEECSSCCCGGGGGGCC--------------SSCCTTSHH
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCC--------------CCEECCCCH
T ss_conf             667657666445698999999999999985377802599986168788733256488--------------520776218


Q ss_pred             HHHHHHHHHH
Q ss_conf             9999999984
Q batch____       448 FGWYAEVIKT  457 (470)
Q Consensus       448 ~~~y~~i~~~  457 (470)
                      +++.++.-+.
T Consensus       303 ~~v~~~~~~~  312 (316)
T c3civA_         303 EDVVARAFSA  312 (316)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
T ss_conf             9999999988