Job Description P76340 Confidence 99.85% Date Thu Jan 5 12:21:57 GMT 2012 Rank 13 Aligned Residues 193 % Identity 28% Template c1rnlA_ PDB info PDB header:signal transduction protein Chain: A: PDB Molecule:nitrate/nitrite response regulator protein narl; PDBTitle: the nitrate/nitrite response regulator protein narl from narl Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.																																												.
Query SS confidence																										.	.																																												.
Query Sequence		M	K	I	L	L	I	E	D	N	Q	R	T	Q	E	W	V	T	Q	G	L	S	E	A	G	.	.	Y	V	I	D	A	V	S	D	G	R	D	G	L	Y	L	A	L	K	D	D	Y	A	L	I	I	L	D	I	M	L	P	G	M	D	G	W	Q	I	L	Q	T	L	R	.	T	A	K	Q	T	P	V	I	C	L
Query Conservation																										.	.																																												.
Alig confidence																										.	.																																												.
Template Conservation
Template Sequence		A	T	I	L	L	I	D	D	H	P	M	L	R	T	G	V	K	Q	L	I	S	M	A	P	D	I	T	V	V	G	E	A	S	N	G	E	Q	G	I	E	L	A	E	S	L	D	P	D	L	I	L	L	D	L	N	M	P	G	M	N	G	L	E	T	L	D	K	L	R	E	K	S	L	S	G	R	I	V	V	F
Template Known Secondary structure									S														T		T	T								S	S														S						T	T		G	G	G										T	T	S				S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	R	D	S	V	D	D	R	V	R	G	L	D	S	G	A	N	D	Y	L	V	K	P	F	S	F	S	E	L	L	A	R	V	R	A	Q	L	R	Q	H	H	A	L	N	S	T	L	E	I	S	G	L	R	M	D	S	V	S	H	S	V	S	R	D	N	I	S	I	T	L	T	R	K	E	F	Q	L	L	W
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	V	S	N	H	E	E	D	V	V	T	A	L	K	R	G	A	D	G	Y	L	L	K	D	M	E	P	E	D	L	L	K	A	L	H	Q	A	A	A	G	E	M	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	S	E	A	L	T	P	V	L	A	A	S	L	Q	L	T	P	R	E	R	D	I	L	K
Template Known Secondary structure			S		S											T	T		S					T	T	S															S			.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.														.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	S	R	A	G	E	I	I	P	R	T	V	I	A	S	E	I	W	G	I	N	F	D	S	D	T	N	T	V	D	V	A	I	R	R	L	R	A	K	V	D	D	P	F	P	E	K	L	I	A	T	I	R	G	M	G
Query Conservation
Alig confidence							.	.	.	.											.	.	.	.	.
Template Conservation							.	.	.	.											.	.	.	.	.
Template Sequence		L	I	A	Q	G	.	.	.	.	L	P	N	K	M	I	A	R	R	L	.	.	.	.	.	D	I	T	E	S	T	V	K	V	H	V	K	H	M	L	K	K	M	K	L	K	S	R	V	E	A	A	V	W	V	H	Q	E	R
Template Known Secondary structure					T	T	.	.	.	.											.	.	.	.	.	T																	T	T			S												T
Template Predicted Secondary structure							.	.	.	.											.	.	.	.	.
Template SS confidence
		166	.	.	.	170					.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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