13 c1rnlA_ Probab=99.85   E-value=3.1e-21  Score=136.87  Aligned_columns=193  Identities=28%

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHC-CCCCCCCCCC
Q ss_conf             959998699899999999999889--8999999989999999837995277531477521001345530-3655431134
Q batch____         1 MKILLIEDNQRTQEWVTQGLSEAG--YVIDAVSDGRDGLYLALKDDYALIILDIMLPGMDGWQILQTLR-TAKQTPVICL   77 (223)
Q Consensus         1 mkILiVdDd~~~~~~l~~~L~~~g--~~V~~a~~~~eal~~~~~~~~dlii~d~~~~~~~g~~~~~~~~-~~~~~~ii~~   77 (223)
                      +||||||||+.++..++..|+..+  ..|.+|.|+.+|+..+....||++++|+.+|+++|...+...+ ..+..+++++
T Consensus         3 i~Ilivdd~~~~~~~l~~~L~~~~~~~~v~~a~~~~eal~~~~~~~pdiilld~~l~~~~g~~~~~~~~~~~~~~~~~~~   82 (200)
T c1rnlA_           3 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVF   82 (200)
T ss_dssp             EEEEEECSCHHHHHHHHHHHHTCTTEEEEEEESSHHHHHHHHHHHCCSEEEEETTCGGGCHHHHHHHHTTSCCCSEEEEE
T ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf             08999749989999999999848981799997898999999987199755421111100013689997420310012344


Q ss_pred             CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             43363777555665420123310111122222222222222222222222222222222222221111111012322111
Q batch____        78 TARDSVDDRVRGLDSGANDYLVKPFSFSELLARVRAQLRQHHALNSTLEISGLRMDSVSHSVSRDNISITLTRKEFQLLW  157 (223)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~e~~ll~  157 (223)
                      ++.............+..++..++..................             ...............+|.+|..++.
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~lt~re~~vl~  149 (200)
T c1rnlA_          83 SVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM-------------VLSEALTPVLAASLQLTPRERDILK  149 (200)
T ss_dssp             CSCSCHHHHHHHHHTTCSEEECTTSCHHHHHHHHHHHHHSCC-------------CCCTTTHHHHHHHCCCCHHHHHHHH
T ss_pred             CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-------------CCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             453101110000112222221001222222222222222222-------------2222222111111112221111122


Q ss_pred             HHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCC
Q ss_conf             1101420134699999985047888874189999999999700588110488757875
Q batch____       158 LLASRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPFPEKLIATIRGMG  215 (223)
Q Consensus       158 ~l~~~~~~~~sr~~l~~~v~~~~~~~~~~ti~~~i~rLR~KL~~~~~~~~I~tv~g~G  215 (223)
                      ++...    .|..+|++.+     +.+.+||++|+++|++||+..+..+.+......|
T Consensus       150 ~~~~g----~s~keIA~~L-----~iS~~TV~~h~~~i~~KL~v~nr~el~~~a~~~g  198 (200)
T c1rnlA_         150 LIAQG----LPNKMIARRL-----DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER  198 (200)
T ss_dssp             HHHTT----CCHHHHHHHH-----TCCHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHT
T ss_pred             CCCCC----CCHHHHHHHH-----CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
T ss_conf             24567----7689989886-----8870699999999999817998899999999817