Job Description P76134 Confidence 99.41% Date Thu Jan 5 12:19:23 GMT 2012 Rank 12 Aligned Residues 183 % Identity 16% Template c3rfaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ribosomal rna large subunit methyltransferase n; PDBTitle: x-ray structure of rlmn from escherichia coli in complex with s-2 adenosylmethionine Resolution 2.05 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.									.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.													.
Query SS confidence																																							.	.	.	.	.	.	.	.													.
Query Sequence		C	N	L	K	C	D	Y	C	F	Y	L	E	K	E	S	Q	F	T	H	E	K	W	M	D	D	S	T	L	K	E	F	I	K	Q	Y	I	A	.	.	.	.	.	.	.	.	A	S	G	N	Q	V	Y	F	T	W	Q	G	.	G	E	P	T	L	A	G	L	D	F	F	R	K	V	I	H	Y	Q	Q	R	Y	A
Query Conservation																																							.	.	.	.	.	.	.	.													.
Alig confidence											.	.	.	.																									.	.	.	.	.	.	.	.													.							.
Template Conservation											.	.	.	.																																																				.
Template Sequence		C	A	L	E	C	K	F	C	S	.	.	.	.	T	A	Q	Q	G	F	N	R	N	L	R	V	S	E	I	I	G	Q	V	W	R	A	A	K	I	V	G	A	A	K	V	T	G	Q	R	P	I	T	N	V	V	M	M	G	M	G	E	P	L	L	N	.	L	N	N	V	V	P	A	M	E	I	M	L	D	D	F
Template Known Secondary structure			S	S			T	T		G	.	.	.	.	G	G	T	T																													S	S		S		S						S	S	S		G	G	G		.													S	T	T
Template Predicted Secondary structure											.	.	.	.																																																				.
Template SS confidence
		125	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.					150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.
Query SS confidence																																																																					.	.	.	.
Query Sequence		G	Q	K	R	I	F	N	A	L	Q	T	N	G	I	L	L	N	N	E	W	C	A	F	L	K	E	H	E	F	L	V	G	I	S	I	D	G	P	Q	E	L	H	D	R	Y	R	R	S	N	S	G	N	G	T	F	A	K	V	I	A	A	I	E	R	L	K	S	.	.	.	.	Y	Q	V	E	F	N	T	L	T
Query Conservation																																																																					.	.	.	.
Alig confidence																																																																					.	.	.	.
Template Conservation
Template Sequence		G	F	G	L	S	K	R	R	V	T	L	S	T	S	G	V	V	P	A	L	D	K	L	G	D	M	I	D	V	A	L	A	I	S	L	H	A	P	N	D	E	I	R	D	E	I	V	P	I	N	K	K	Y	N	I	E	T	F	L	A	A	V	R	R	Y	L	E	K	S	N	A	N	Q	G	R	V	T	I	E	Y
Template Known Secondary structure		T	T				G	G	G						S																								S	S								S	G	G	G	G	T	S																	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		159	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure						.	.	.
Query SS confidence						.	.	.
Query Sequence		V	I	N	N	.	.	.	V	N	V	H	Y	P	L	E	V	Y	H	F	L	K	S	I	G	S	K	H	M	Q	F	I	E	L	L	E	T	G	T	P	N	I	D	F	S	G
Query Conservation						.	.	.
Alig confidence						.	.	.																			.
Template Conservation																											.
Template Sequence		V	M	L	D	H	V	N	D	G	T	E	H	A	H	Q	L	A	E	L	L	K	D	T	P	C	.	K	I	N	L	I	P	W	N	P	F	P	G	A	P	Y	G	R	S	S
Template Known Secondary structure				B	T	T	T	T		S											T	T	T	S			.											T	T					B
Template Predicted Secondary structure																											.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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