12 c3rfaA_ Probab=99.41   E-value=1.8e-11  Score=87.56  Aligned_columns=183  Identities=16%

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH--------CCCCEEEEEEEC-CCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             5889846788887655574479998999999999996--------599869999977-8844688068999999999722
Q batch____        12 CNLKCDYCFYLEKESQFTHEKWMDDSTLKEFIKQYIA--------ASGNQVYFTWQG-GEPTLAGLDFFRKVIHYQQRYA   82 (385)
Q Consensus        12 CNl~C~yC~~~~~~~~~~~~~~m~~e~~~~~i~~~~~--------~~~~~~~i~~~G-GEPlL~~~~~~~~i~~~~~~~~   82 (385)
                      ||++|.||.    .........++.+++..-+..+.+        .+.....+.|.| ||||++ .+.+.++++.+.+..
T Consensus       109 C~~~C~FC~----t~~~g~~R~ls~~EIv~qv~~~~~~~~~~~~~~~~~i~~vv~~g~GEPl~n-~~~v~~~l~~l~~~~  183 (333)
T c3rfaA_         109 CALECKFCS----TAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLN-LNNVVPAMEIMLDDF  183 (333)
T ss_dssp             CSSCCTTCG----GGTTCEEEECCHHHHHHHHHHHHHHHCCHHHHSSCSCSEEEECSSSCGGGC-HHHHHHHHHHHHSTT
T ss_pred             CCCCCEEEE----CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC-HHHHHHHHHHHHHCC
T ss_conf             536670341----124485013588999999999998641433203554212575058632249-899999999852115


Q ss_pred             CCCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH----CCCCEEEEE
Q ss_conf             3486899842667669989999998639835987328767865653037898748999999999997----699759996
Q batch____        83 GQKRIFNALQTNGILLNNEWCAFLKEHEFLVGISIDGPQELHDRYRRSNSGNGTFAKVIAAIERLKS----YQVEFNTLT  158 (385)
Q Consensus        83 ~~~~~~~~~~tNg~l~~~~~~~~l~~~~~~~~~s~dg~~~~~d~~r~~~~g~g~f~~v~~~i~~l~~----~g~~~~i~~  158 (385)
                      ....-...++++.....+.+.++.....+.+.+|++++.+..-..-.-.+.+.++++++++++.+.+    .|+++.+..
T Consensus       184 gl~i~~~~itvst~g~~~~i~~L~~~~~~~l~isl~a~~~e~r~~l~p~~k~~~l~~i~~~~~~~~~~~~~~g~~v~i~y  263 (333)
T c3rfaA_         184 GFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEY  263 (333)
T ss_dssp             TTCCCGGGEEEEESCCHHHHHHHHHHCCCEEEEECCCSSHHHHHHHSGGGGTSCHHHHHHHHHHHHHHCTTTTTCEEEEE
T ss_pred             CEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf             52430112101575541789998731584899806779877862314067888999999999999997764398089985


Q ss_pred             ECCC---CCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCC
Q ss_conf             1265---89778999999999569976899985304777643333
Q batch____       159 VINN---VNVHYPLEVYHFLKSIGSKHMQFIELLETGTPNIDFSG  200 (385)
Q Consensus       159 ~~~~---~n~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~  200 (385)
                      ++-+   ++.+++.++++++..++. .+++.++.|..........
T Consensus       264 ~li~g~nDs~e~a~~l~~~l~~~~~-~Vnlip~nP~~g~~~~~p~  307 (333)
T c3rfaA_         264 VMLDHVNDGTEHAHQLAELLKDTPC-KINLIPWNPFPGAPYGRSS  307 (333)
T ss_dssp             EEBTTTTCSHHHHHHHHHHTTTSCE-EEEEEECCCCTTCCCCBCC
T ss_pred             EECCCCCCCHHHHHHHHHHHHCCCC-EEEEEECCCCCCCCCCCCC
T ss_conf             5408999898999999999850898-7999962468888877889