Email l.a.kelley@imperial.ac.uk Description P77596 Date Thu Jan 5 12:30:53 GMT 2012 Unique Job ID 0c7a84c7c3bd8bb1

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2gp4A_ 100.0 28 PDB header:lyase Chain: A: PDB Molecule:6-phosphogluconate dehydratase; PDBTitle: structure of [fes]cluster-free apo form of 6-phosphogluconate2 dehydratase from shewanella oneidensis 2 d2gp4a2 100.0 27 Fold:IlvD/EDD N-terminal domain-like Superfamily:IlvD/EDD N-terminal domain-like Family:lvD/EDD N-terminal domain-like 3 d2gp4a1 100.0 26 Fold:The "swivelling" beta/beta/alpha domain Superfamily:LeuD/IlvD-like Family:IlvD/EDD C-terminal domain-like 4 c2pcnA_ 79.3 17 PDB header:transferase Chain: A: PDB Molecule:s-adenosylmethionine:2-demethylmenaquinone PDBTitle: crystal structure of s-adenosylmethionine: 2-dimethylmenaquinone2 methyltransferase (gk_1813) from geobacillus kaustophilus hta426 5 c2jv2A_ 69.3 25 PDB header:unknown function Chain: A: PDB Molecule:putative uncharacterized protein ph1500; PDBTitle: solution structure of the n-terminal domain of ph1500 6 d1nxja_ 66.5 15 Fold:The "swivelling" beta/beta/alpha domain Superfamily:RraA-like Family:RraA-like 7 c1nxjA_ 66.5 15 PDB header:unknown function Chain: A: PDB Molecule:probable s-adenosylmethionine:2- PDBTitle: structure of rv3853 from mycobacterium tuberculosis 8 c3c8oB_ 64.9 18 PDB header:hydrolase regulator Chain: B: PDB Molecule:regulator of ribonuclease activity a; PDBTitle: the crystal structure of rraa from pao1 9 d1vi4a_ 62.5 13 Fold:The "swivelling" beta/beta/alpha domain Superfamily:RraA-like Family:RraA-like 10 d1q5xa_ 52.4 15 Fold:The "swivelling" beta/beta/alpha domain Superfamily:RraA-like Family:RraA-like 11 d1agxa_ 51.7 15 Fold:Glutaminase/Asparaginase Superfamily:Glutaminase/Asparaginase Family:Glutaminase/Asparaginase 12 d1pl8a1 50.0 21 Fold:GroES-like Superfamily:GroES-like Family:Alcohol dehydrogenase-like, N-terminal domain 13 d1wsaa_ 45.6 21 Fold:Glutaminase/Asparaginase Superfamily:Glutaminase/Asparaginase Family:Glutaminase/Asparaginase 14 d1y0pa2 42.7 23 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain 15 d2hi6a1 40.6 11 Fold:The "swivelling" beta/beta/alpha domain Superfamily:LeuD/IlvD-like Family:AF0055-like 16 d1ydga_ 37.2 13 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:WrbA-like 17 d1fjca_ 35.2 34 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 18 d1wl8a1 35.1 23 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Class I glutamine amidotransferases (GAT) 19 d1r31a1 35.0 35 Fold:Ferredoxin-like Superfamily:NAD-binding domain of HMG-CoA reductase Family:NAD-binding domain of HMG-CoA reductase 20 d1j33a_ 34.4 19 Fold:Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) Superfamily:Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) Family:Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) 21 d1od5a1 not modelled 34.0 18 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 22 d1v7la_ not modelled 32.1 17 Fold:The "swivelling" beta/beta/alpha domain Superfamily:LeuD/IlvD-like Family:LeuD-like 23 d1zyma2 not modelled 32.0 9 Fold:The "swivelling" beta/beta/alpha domain Superfamily:Phosphohistidine domain Family:N-terminal domain of enzyme I of the PEP:sugar phosphotransferase system 24 c1dm9A_ not modelled 32.0 15 PDB header:structural genomics Chain: A: PDB Molecule:hypothetical 15.5 kd protein in mrca-pcka PDBTitle: heat shock protein 15 kd 25 d1dm9a_ not modelled 32.0 15 Fold:Alpha-L RNA-binding motif Superfamily:Alpha-L RNA-binding motif Family:Heat shock protein 15 kD 26 d1kola2 not modelled 31.9 24 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 27 d1j3la_ not modelled 31.8 26 Fold:The "swivelling" beta/beta/alpha domain Superfamily:RraA-like Family:RraA-like 28 c1sddA_ not modelled 31.5 21 PDB header:blood clotting Chain: A: PDB Molecule:coagulation factor v; PDBTitle: crystal structure of bovine factor vai 29 d1ujva_ not modelled 31.4 32 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:PDZ domain 30 d1o7ja_ not modelled 31.0 12 Fold:Glutaminase/Asparaginase Superfamily:Glutaminase/Asparaginase Family:Glutaminase/Asparaginase 31 d1r61a_ not modelled 28.7 15 Fold:The "swivelling" beta/beta/alpha domain Superfamily:Putative cyclase Family:Putative cyclase 32 d1rk8a_ not modelled 28.4 21 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 33 c1rkjA_ not modelled 26.9 30 PDB header:transcription/rna Chain: A: PDB Molecule:nucleolin; PDBTitle: solution structure of the complex formed by the two n-2 terminal rna-binding domains of nucleolin and a pre-rrna3 target 34 c3l83A_ not modelled 25.9 20 PDB header:transferase Chain: A: PDB Molecule:glutamine amido transferase; PDBTitle: crystal structure of glutamine amido transferase from methylobacillus2 flagellatus 35 d1a9xb2 not modelled 25.3 22 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Class I glutamine amidotransferases (GAT) 36 d1lcya1 not modelled 25.0 34 Fold:PDZ domain-like Superfamily:PDZ domain-like Family:HtrA-like serine proteases 37 d2etna2 not modelled 24.4 14 Fold:FKBP-like Superfamily:FKBP-like Family:GreA transcript cleavage factor, C-terminal domain 38 c2qv5A_ not modelled 24.3 26 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu2773; PDBTitle: crystal structure of uncharacterized protein atu2773 from2 agrobacterium tumefaciens c58 39 c3nojA_ not modelled 24.2 29 PDB header:lyase Chain: A: PDB Molecule:4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate PDBTitle: the structure of hmg/cha aldolase from the protocatechuate degradation2 pathway of pseudomonas putida 40 c3t6oA_ not modelled 24.1 18 PDB header:transport protein Chain: A: PDB Molecule:sulfate transporter/antisigma-factor antagonist stas; PDBTitle: the structure of an anti-sigma-factor antagonist (stas) domain protein2 from planctomyces limnophilus. 41 c3f43A_ not modelled 24.0 12 PDB header:transcription Chain: A: PDB Molecule:putative anti-sigma factor antagonist tm1081; PDBTitle: crystal structure of a putative anti-sigma factor antagonist (tm1081)2 from thermotoga maritima at 1.59 a resolution 42 c3kw8A_ not modelled 23.6 21 PDB header:oxidoreductase Chain: A: PDB Molecule:putative copper oxidase; PDBTitle: two-domain laccase from streptomyces coelicolor at 2.3 a resolution 43 d2et1a1 not modelled 23.3 14 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 44 d1k78a1 not modelled 22.9 31 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Paired domain 45 c3fm3B_ not modelled 22.9 19 PDB header:hydrolase Chain: B: PDB Molecule:methionine aminopeptidase 2; PDBTitle: crystal structure of an encephalitozoon cuniculi methionine2 aminopeptidase type 2 46 d2bs2a2 not modelled 22.8 26 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain 47 c1yw7A_ not modelled 22.4 32 PDB header:hydrolase Chain: A: PDB Molecule:methionine aminopeptidase 2; PDBTitle: h-metap2 complexed with a444148 48 d6paxa1 not modelled 21.5 31 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Paired domain 49 d1kbla2 not modelled 21.5 12 Fold:The "swivelling" beta/beta/alpha domain Superfamily:Phosphohistidine domain Family:Pyruvate phosphate dikinase, central domain 50 d2f23a2 not modelled 21.5 14 Fold:FKBP-like Superfamily:FKBP-like Family:GreA transcript cleavage factor, C-terminal domain 51 c2pkpA_ not modelled 21.3 24 PDB header:lyase Chain: A: PDB Molecule:homoaconitase small subunit; PDBTitle: crystal structure of 3-isopropylmalate dehydratase (leud)2 from methhanocaldococcus jannaschii dsm2661 (mj1271) 52 d1qdlb_ not modelled 21.1 18 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Class I glutamine amidotransferases (GAT) 53 d1sdda1 not modelled 20.7 21 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 54 c3ln3A_ not modelled 20.3 14 PDB header:oxidoreductase Chain: A: PDB Molecule:dihydrodiol dehydrogenase; PDBTitle: crystal structure of putative reductase (np_038806.2) from2 mus musculus at 1.18 a resolution 55 c3mvnA_ not modelled 19.9 10 PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate:l-alanyl-gamma-d-glutamayl-medo- PDBTitle: crystal structure of a domain from a putative udp-n-acetylmuramate:l-2 alanyl-gamma-d-glutamayl-medo-diaminopimelate ligase from haemophilus3 ducreyi 35000hp 56 d1jb0k_ not modelled 18.8 44 Fold:Photosystem I reaction center subunit X, PsaK Superfamily:Photosystem I reaction center subunit X, PsaK Family:Photosystem I reaction center subunit X, PsaK 57 c1jb0K_ not modelled 18.8 44 PDB header:photosynthesis Chain: K: PDB Molecule:photosystem 1 reaction centre subunit x; PDBTitle: crystal structure of photosystem i: a photosynthetic reaction center2 and core antenna system from cyanobacteria 58 c1ezaA_ not modelled 18.8 14 PDB header:phosphotransferase Chain: A: PDB Molecule:enzyme i; PDBTitle: amino terminal domain of enzyme i from escherichia coli nmr,2 restrained regularized mean structure 59 c2cdqB_ not modelled 18.0 26 PDB header:transferase Chain: B: PDB Molecule:aspartokinase; PDBTitle: crystal structure of arabidopsis thaliana aspartate kinase2 complexed with lysine and s-adenosylmethionine 60 d1vbga2 not modelled 17.8 12 Fold:The "swivelling" beta/beta/alpha domain Superfamily:Phosphohistidine domain Family:Pyruvate phosphate dikinase, central domain 61 d1ueba3 not modelled 17.8 6 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 62 c1wa1X_ not modelled 17.7 16 PDB header:reductase Chain: X: PDB Molecule:dissimilatory copper-containing nitrite PDBTitle: crystal structure of h313q mutant of alcaligenes2 xylosoxidans nitrite reductase 63 c2hcuA_ not modelled 17.6 11 PDB header:lyase Chain: A: PDB Molecule:3-isopropylmalate dehydratase small subunit; PDBTitle: crystal structure of smu.1381 (or leud) from streptococcus2 mutans 64 c3cdzA_ not modelled 17.2 21 PDB header:blood clotting Chain: A: PDB Molecule:coagulation factor viii heavy chain; PDBTitle: crystal structure of human factor viii 65 c2y0fD_ not modelled 17.1 20 PDB header:oxidoreductase Chain: D: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PDBTitle: structure of gcpe (ispg) from thermus thermophilus hb27 66 d2cqaa1 not modelled 17.1 18 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:TIP49 domain 67 c3soeA_ not modelled 17.1 22 PDB header:signaling protein Chain: A: PDB Molecule:membrane-associated guanylate kinase, ww and pdz domain- PDBTitle: crystal structure of the 3rd pdz domain of the human membrane-2 associated guanylate kinase, ww and pdz domain-containing protein 33 (magi3) 68 c1gph1_ not modelled 17.0 22 PDB header:transferase(glutamine amidotransferase) Chain: 1: PDB Molecule:glutamine phosphoribosyl-pyrophosphate amidotransferase; PDBTitle: structure of the allosteric regulatory enzyme of purine biosynthesis 69 d1l5oa_ not modelled 16.6 18 Fold:Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) Superfamily:Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) Family:Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) 70 c2p4vA_ not modelled 16.4 10 PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor greb; PDBTitle: crystal structure of the transcript cleavage factor, greb2 at 2.6a resolution 71 c2e5hA_ not modelled 16.2 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:zinc finger cchc-type and rna-binding motif- PDBTitle: solution structure of rna binding domain in zinc finger2 cchc-type and rna binding motif 1 72 c2c5qE_ not modelled 16.0 8 PDB header:structural genomics,unknown function Chain: E: PDB Molecule:rraa-like protein yer010c; PDBTitle: crystal structure of yeast yer010cp 73 d1p3da2 not modelled 16.0 19 Fold:MurD-like peptide ligases, peptide-binding domain Superfamily:MurD-like peptide ligases, peptide-binding domain Family:MurCDEF C-terminal domain 74 c1ecjB_ not modelled 15.7 16 PDB header:transferase Chain: B: PDB Molecule:glutamine phosphoribosylpyrophosphate PDBTitle: escherichia coli glutamine phosphoribosylpyrophosphate2 (prpp) amidotransferase complexed with 2 amp per tetramer 75 d2j5wa4 not modelled 15.7 21 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 76 c3lzkC_ not modelled 15.4 25 PDB header:hydrolase Chain: C: PDB Molecule:fumarylacetoacetate hydrolase family protein; PDBTitle: the crystal structure of a probably aromatic amino acid2 degradation protein from sinorhizobium meliloti 1021 77 c3nyeA_ not modelled 15.2 30 PDB header:oxidoreductase Chain: A: PDB Molecule:d-arginine dehydrogenase; PDBTitle: crystal structure of pseudomonas aeruginosa d-arginine dehydrogenase2 in complex with imino-arginine 78 d1kv7a1 not modelled 15.2 21 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 79 d1oe1a1 not modelled 15.1 16 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 80 d2a9va1 not modelled 15.0 23 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Class I glutamine amidotransferases (GAT) 81 c1kzlA_ not modelled 15.0 23 PDB header:transferase Chain: A: PDB Molecule:riboflavin synthase; PDBTitle: riboflavin synthase from s.pombe bound to2 carboxyethyllumazine 82 d1lvla1 not modelled 14.9 32 Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains 83 d1l5ja2 not modelled 14.7 18 Fold:The "swivelling" beta/beta/alpha domain Superfamily:LeuD/IlvD-like Family:LeuD-like 84 c2zooA_ not modelled 14.5 26 PDB header:oxidoreductase Chain: A: PDB Molecule:probable nitrite reductase; PDBTitle: crystal structure of nitrite reductase from pseudoalteromonas2 haloplanktis tac125 85 d2j5wa3 not modelled 14.5 21 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 86 d1e3ja2 not modelled 14.1 36 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 87 c3u7jA_ not modelled 13.9 20 PDB header:isomerase Chain: A: PDB Molecule:ribose-5-phosphate isomerase a; PDBTitle: crystal structure of ribose-5-phosphate isomerase a from burkholderia2 thailandensis 88 d1h6za2 not modelled 13.9 24 Fold:The "swivelling" beta/beta/alpha domain Superfamily:Phosphohistidine domain Family:Pyruvate phosphate dikinase, central domain 89 c3g5wC_ not modelled 13.7 16 PDB header:metal binding protein Chain: C: PDB Molecule:multicopper oxidase type 1; PDBTitle: crystal structure of blue copper oxidase from nitrosomonas europaea 90 d1e8ca2 not modelled 13.7 24 Fold:MurD-like peptide ligases, peptide-binding domain Superfamily:MurD-like peptide ligases, peptide-binding domain Family:MurCDEF C-terminal domain 91 d1o1ya_ not modelled 13.6 25 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:Class I glutamine amidotransferases (GAT) 92 d1fxza2 not modelled 13.4 13 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 93 c2e28A_ not modelled 13.4 20 PDB header:transferase Chain: A: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure analysis of pyruvate kinase from bacillus2 stearothermophilus 94 d1pl8a2 not modelled 13.2 35 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 95 d1aoza1 not modelled 13.1 16 Fold:Cupredoxin-like Superfamily:Cupredoxins Family:Multidomain cupredoxins 96 d1ykfa2 not modelled 13.1 27 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Alcohol dehydrogenase-like, C-terminal domain 97 c3cgnA_ not modelled 13.0 16 PDB header:isomerase Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase; PDBTitle: crystal structure of thermophilic slyd 98 c1yq4A_ not modelled 13.0 24 PDB header:oxidoreductase Chain: A: PDB Molecule:succinate dehydrogenase flavoprotein subunit; PDBTitle: avian respiratory complex ii with 3-nitropropionate and ubiquinone 99 c3fijD_ not modelled 12.9 18 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:lin1909 protein; PDBTitle: crystal structure of a uncharacterized protein lin1909