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Job DescriptionP12995
Confidence99.50%DateThu Jan 5 11:33:14 GMT 2012
Rank234Aligned Residues299
% Identity10%Templated2hoxa1
SCOP infoPLP-dependent transferase-like PLP-dependent transferases AAT-like
Resolution1.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   75....80.........90.........100. ........110.........120.........130.........140.........150.
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Query Sequence  MSHVMFGGITHAPAIELCRKLVAMTPQ. . . PLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGA
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Template Sequence  YFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQ
Template Known Secondary structure  SS
SS

TT

T
B

TT
SS

TTT
TTS


SS

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   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   152.......160.........170.........180.........190.........200.........210.........220.........230.
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Query Sequence  MSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRI
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Template Sequence  TKYFDKKGYVWAG. . . . . . . . . . . . . . . . . . . . . . . . . . . . NAANYVNVSNPEQYIEMVTSPNNPEGLLRH. . . . . . . . .
Template Known Secondary structure  S

TT............................GGGGTT
S
GGGSS
TTT




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   172.......180.... .....190.........200.........210....
 
   232.......240.........250.........260.........270.........280......... 290.........300.........310
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Query Sequence  RKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTT. REVAETISNGEAGCFMHGPTF
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Template Sequence  . . . AVIKGCKSIYDMVYYWPHYTPIKYKA. . . DEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYMTK. . . . . NTE
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SSTT

TT
STTTS


S
B...

STS
GGG



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   215....220.........230.........240 .........250.........260.........270.........280 ...
 
   311........320....... ..330.........340.........350......... 360.....
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Query Sequence  MGNPLACAAANASLAIL. . . . . . . . . . . . . ESGDWQQQVADIEVQLREQLAPARDAEMVADV. . . . . . . . . . . . RVLGAI
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Template Conservation    
   
 

   
                     
  
  
   
   
       
   
                 
Template Sequence  GTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSY
Template Known Secondary structure  S

TTSTTSTTSSS




S
TTTT



S
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   284.....290.........300.........310.........320.........330.........340.........350.........360...
 
   366...370.........380.........390... ......400.........410.........420....
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Query Sequence  GVVETTHPVNMAALQKFFVEQGVWIRPF. . . . . . GKLIYLMPPYIILPQQLQRLTAAVNRAVQDE
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Template Sequence  AWVKCEWE. EDKDCYQTFQNGRINTQNGVGFEASSRYVRLSL. . IKTQDDFDQLMYYLKDMVKAK
Template Known Secondary structure 
SG.GG
STT
GGGGTS
TT
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T

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   364.....370. ........380.........390.........400.... .....410.........420.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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