Return to main results Retrieve Phyre Job Id

Job DescriptionP77258
Confidence98.94%DateThu Jan 5 12:26:56 GMT 2012
Rank52Aligned Residues232
% Identity19%Templatec1jcnA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:inosine monophosphate dehydrogenase i; PDBTitle: binary complex of human type-i inosine monophosphate dehydrogenase2 with 6-cl-imp
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50.........60.........70.........80.........90..
Predicted Secondary structure 









































Query SS confidence 















































































Query Sequence  GAITAANRIFMAPLTRLRSIEPGDIPTPLMAEYYRQRASAGLIISEATQISAQAKGYAGAPGIHSPEQIAAWKKITAGVH
Query Conservation 
   





  

        
          
  

  



 
   
            
  
  
     
   

Alig confidence 















........























....................











Template Conservation    
 
  


 


 
........

   

 


  

 
 
     ....................            
Template Sequence  RKITLKTPLISSPMDT. . . . . . . . VTEADMAIAMALMGGIGFIHHNCT. . . . . . . . . . . . . . . . . . . . PEFQANEVRKVK
Template Known Secondary structure  SS
SS



TT........T
STT


SS
....................
Template Predicted Secondary structure 











........












....................
Template SS confidence 















































































   57..60.........70.. .......80.........90...... ...100........
 
   93......100.........110.........120.........130.........140.........150.........160..
Predicted Secondary structure 




















































..........
Query SS confidence 





































































. . . . . . . . . .
Query Sequence  AENGHMAVQLWHTGRISHASLQPGGQAPVAPSALSAGTRTSLRDENGQAIRVETSMPRALELEEIPGIVN. . . . . . . . . .
Query Conservation    
     

 
 

               

                        
  

  

  

 ..........
Alig confidence 









................











































..........
Template Conservation            ................                                                   
  
Template Sequence  NFEQGFITDP. . . . . . . . . . . . . . . . VVLSPGIPITEVGIVTSRDIDPRIELVVAPAGVTLKEANEILQRSKKGKLPIVN
Template Known Secondary structure  T

TTS
SS
................





S




TTTT


B



TT

STTTTTT
S


S
Template Predicted Secondary structure 







................




















Template SS confidence 















































































   109110........ .120.........130.........140.........150.........160.........170..
 
   163......170.........180.........190.........200.....
Predicted Secondary structure  .....................................



















Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .










































Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DFRQAIANAREAGFDLVELHSAHGYLLHQFLSPSSNHRTDQYG
Query Conservation  ..................................... 
  

 

  








 





 




  
 





Alig confidence  .....................................
























..................
Template Conservation 
                                            
  

 
          ..................
Template Sequence  DCDELVRTDLKKNRDYPLASKDSQKQLLCGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGN. . . . . . . . . . . . . . . . . .
Template Known Secondary structure  SSS






SS



TT

B
TTS
B


SSTTTT
S

S


..................
Template Predicted Secondary structure 






































..................
Template SS confidence 















































































   214.....220.........230.........240.........250.........260.........270.....
 
   206...210.........220.........230.........240.........250.........260.........270.........280.
Predicted Secondary structure 

































....
Query SS confidence 











































































. . . .
Query Sequence  GSVENRARLVLEVVDAGIEEWGADRIGIRVSPIGTFQNTDNGPNEEADALYLIEQLGKRGIAYLHMSEPDWAGGEP. . . .
Query Conservation 

 


 
   


 


  

   
 



                
   
   
   


 
 

         ....
Alig confidence  ......






















............













....
















....
Template Conservation  ......       
  

      


 
............

 
 


  
   ....




 

 


         
Template Sequence  . . . . . . SVYQIAMVHYIKQKYPHLQVIGG. . . . . . . . . . . . NVVTAAQAKNLIDA. . . . GVDGLRVGMGCGSICITQEVM
Template Known Secondary structure  ......S
TT
............
S....T
S
SS
S

BTTB


Template Predicted Secondary structure  ......





............




....
















Template SS confidence 















































































   280.........290.........300.. .......310...... ...320.........330.......
 
   282.......290.... .....300.... .....310.........320.........
Predicted Secondary structure  ....
...





.







Query SS confidence  . . . .












. . .









.
























Query Sequence  . . . . YTDAFREKVRARF. . . HGPIIGAGAY. TVEKAETLIGKGLIDAVAFGRDWIA
Query Conservation  ....        

  
... 



  
 
.
 
 

  
  
 

 
 


  

Alig confidence  ....












...









.











.











Template Conservation    
 
    
           
 







 
 

 





.



 


 

 
Template Sequence  ACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALG. ASTVMMGSLLAA
Template Known Secondary structure  S



GGGT

S


STT.
SSTTTTT
Template Predicted Secondary structure 
















.


Template SS confidence 























































   338.340.........350.........360.........370.........380 .........390..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions