52 c1jcnA_ Probab=98.94   E-value=2.5e-06  Score=59.18  Aligned_columns=232  Identities=19%

Q ss_pred             CCEEECCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             89897378898865478638988988989999999851997899830661774478899862689999999999999998
Q batch____        13 GAITAANRIFMAPLTRLRSIEPGDIPTPLMAEYYRQRASAGLIISEATQISAQAKGYAGAPGIHSPEQIAAWKKITAGVH   92 (365)
Q Consensus        13 g~~~lkNRiv~~pm~~~~~~~~g~~~~~~~~~~y~~ra~~Glii~e~~~v~~~~~~~~~~~~l~~d~~i~~~~~l~~~vh   92 (365)
                      |+++|+-=|+.+||..        +.++.+..-..+.++-|++=....                    .++....+..+.
T Consensus        48 ~~l~l~~PIi~apM~g--------vs~~~la~ava~~Gg~G~i~~~~~--------------------~~~~~~~~~~~~   99 (395)
T c1jcnA_          48 RKITLKTPLISSPMDT--------VTEADMAIAMALMGGIGFIHHNCT--------------------PEFQANEVRKVK   99 (395)
T ss_dssp             SSCEESSCEEECCCTT--------TCSHHHHHHHHHTTCEEEECCSSC--------------------HHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEECCCC--------CCCHHHHHHHHHCCCCEECCCCCC--------------------HHHHHHHHHHHH
T ss_conf             4874343358607744--------489899999982887026147898--------------------579999999998


Q ss_pred             HCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH----------
Q ss_conf             6199168734313432556668567775067654466665555545443456777676389999999999----------
Q batch____        93 AENGHMAVQLWHTGRISHASLQPGGQAPVAPSALSAGTRTSLRDENGQAIRVETSMPRALELEEIPGIVN----------  162 (365)
Q Consensus        93 ~~g~~~~~QL~H~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~ii~----------  162 (365)
                      ..+.....+.                ..+.++.-...............++......+....+-++.+.+          
T Consensus       100 ~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  163 (395)
T c1jcnA_         100 NFEQGFITDP----------------VVLSPGIPITEVGIVTSRDIDPRIELVVAPAGVTLKEANEILQRSKKGKLPIVN  163 (395)
T ss_dssp             TCCTTSCSSC----------------CCCCCCEESCCCCEECTTTTCCCBCCCCEETTCCSTTTTTHHHHHTCSCCCEES
T ss_pred             HHCCCCCCCC----------------EECCCCCCHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEC
T ss_conf             6107666321----------------001676676665565204310133331056622379999999976997378631


Q ss_pred             -------------------------------------HHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCC
Q ss_conf             -------------------------------------9999999999749989999647605787412666683767758
Q batch____       163 -------------------------------------DFRQAIANAREAGFDLVELHSAHGYLLHQFLSPSSNHRTDQYG  205 (365)
Q Consensus       163 -------------------------------------~f~~aA~ra~~aGfDgVeIh~ahGyLl~qFlSp~~N~RtDeYG  205 (365)
                                                           ....-+....++|.|.+.+..+|++                  
T Consensus       164 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ag~d~~~~~~~~~~------------------  225 (395)
T c1jcnA_         164 DCDELVRTDLKKNRDYPLASKDSQKQLLCGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGN------------------  225 (395)
T ss_dssp             SSSCCCCCCCSSCCCCTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCC------------------
T ss_pred             CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCC------------------
T ss_conf             57643102344421786432111223343321456655378899887406965898505777------------------


Q ss_pred             CCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCC----
Q ss_conf             8888867789999999998649770799971011434567889999999999999532698599912688557875----
Q batch____       206 GSVENRARLVLEVVDAGIEEWGADRIGIRVSPIGTFQNTDNGPNEEADALYLIEQLGKRGIAYLHMSEPDWAGGEP----  281 (365)
Q Consensus       206 Gs~enR~R~~~Eii~air~~vg~~~i~vris~~~~~~~~~~~~~~~~e~~~l~~~l~~~Gid~i~vs~~~~~~~~~----  281 (365)
                            ..+..|.++.+|+.++..+|.++            +-.+.+++..+++.    |+|.|.++.........    
T Consensus       226 ------~~~~~~~i~~lr~~~~~~pii~k------------gi~t~edA~~a~~~----GaDgI~Vs~hgG~~~~~~~~~  283 (395)
T c1jcnA_         226 ------SVYQIAMVHYIKQKYPHLQVIGG------------NVVTAAQAKNLIDA----GVDGLRVGMGCGSICITQEVM  283 (395)
T ss_dssp             ------SHHHHHHHHHHHHHCTTCEEEEE------------EECSHHHHHHHHHH----TCSEEEECSSCSCCBTTBCCC
T ss_pred             ------HHHHHHHHHHHHHCCCCCEEEEC------------CCCCHHHHHHHHHC----CCCEEEECCCCCCCCCCCCCC
T ss_conf             ------15778999998741681038971------------77899999999977----998999868888767665456


Q ss_pred             ----CHHHHHHHHHHHH---CCCEEEECCC-CHHHHHHHHHCCCCCEEEECCHHHH
Q ss_conf             ----3089999999872---9989992788-9999999997899879998437750
Q batch____       282 ----YTDAFREKVRARF---HGPIIGAGAY-TVEKAETLIGKGLIDAVAFGRDWIA  329 (365)
Q Consensus       282 ----~~~~~~~~ik~~v---~ipVi~~G~i-t~e~ae~~l~~g~aD~V~lgR~~la  329 (365)
                          +.......+++..   ++|||+.|+| +..++.++|+-| ||.|+|||+|+.
T Consensus       284 ~~g~p~~~~l~~~~~~~~~~~i~VIadGGIr~g~Dv~kALaLG-AdaV~iGr~fl~  338 (395)
T c1jcnA_         284 ACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALG-ASTVMMGSLLAA  338 (395)
T ss_dssp             SCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTT-CSEEEESTTTTT
T ss_pred             CCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCC-CCEEEECHHHHH
T ss_conf             6564248999999997122796599618868889999999727-676654817652