Emaill.a.kelley@imperial.ac.uk
DescriptionP39390
DateThu Jan 5 12:00:21 GMT 2012
Unique Job ID0a496b15adb35c41

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1c3i3fB_



40.8 15 PDB header:unknown function
Chain: B: PDB Molecule:hypothetical protein;
PDBTitle: hypothetical protein from giardia lamblia gl50803_14299
2c3idwA_



40.7 25 PDB header:endocytosis
Chain: A: PDB Molecule:actin cytoskeleton-regulatory complex protein sla1;
PDBTitle: crystal structure of sla1 homology domain 2
3c2rhfA_



38.1 20 PDB header:hydrolase
Chain: A: PDB Molecule:dna helicase recq;
PDBTitle: d. radiodurans recq hrdc domain 3
4c1oxjA_



26.6 11 PDB header:rna binding protein
Chain: A: PDB Molecule:rna-binding protein smaug;
PDBTitle: crystal structure of the smaug rna binding domain
5d2ewca1



22.8 24 Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:YjgF/L-PSP
6d1oxja1



19.8 10 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
7d2e1fa1



19.2 14 Fold:SAM domain-like
Superfamily:HRDC-like
Family:HRDC domain from helicases
8c3kjjL_



18.3 35 PDB header:unknown function
Chain: L: PDB Molecule:nmb1025 protein;
PDBTitle: crystal structure of nmb1025, a member of yjgf protein family, from2 neisseria meningitidis (hexagonal crystal form)
9c3k1rB_



18.2 25 PDB header:structural protein
Chain: B: PDB Molecule:usher syndrome type-1g protein;
PDBTitle: structure of harmonin npdz1 in complex with the sam-pbm of2 sans
10c2of5A_



17.9 19 PDB header:apoptosis
Chain: A: PDB Molecule:death domain-containing protein cradd;
PDBTitle: oligomeric death domain complex
11c3lybC_



17.2 23 PDB header:hydrolase
Chain: C: PDB Molecule:putative endoribonuclease;
PDBTitle: structure of putative endoribonuclease(kp1_3112) from2 klebsiella pneumoniae
12c2nv2U_



15.7 35 PDB header:lyase/transferase
Chain: U: PDB Molecule:pyridoxal biosynthesis lyase pdxs;
PDBTitle: structure of the plp synthase complex pdx1/2 (yaad/e) from bacillus2 subtilis
13c2zbtB_



15.6 30 PDB header:lyase
Chain: B: PDB Molecule:pyridoxal biosynthesis lyase pdxs;
PDBTitle: crystal structure of pyridoxine biosynthesis protein from thermus2 thermophilus hb8
14c3oq9C_



13.9 22 PDB header:apoptosis
Chain: C: PDB Molecule:tumor necrosis factor receptor superfamily member 6;
PDBTitle: structure of the fas/fadd death domain assembly
15c1ow5A_



13.8 12 PDB header:transferase
Chain: A: PDB Molecule:serine/threonine-protein kinase ste11;
PDBTitle: nmr structure of the saccharomyces cerevisiae sam (sterile2 alpha motif) domain
16d1ow5a_



13.8 12 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
17d1onia_



13.3 27 Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:YjgF/L-PSP
18d2cvla1



13.2 27 Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:YjgF/L-PSP
19d1d8ba_



13.2 24 Fold:SAM domain-like
Superfamily:HRDC-like
Family:HRDC domain from helicases
20c3bs7A_



12.9 32 PDB header:signaling protein
Chain: A: PDB Molecule:protein aveugle;
PDBTitle: crystal structure of the sterile alpha motif (sam) domain2 of hyphen/aveugle
21c3bs5A_



not modelled 12.7 29 PDB header:signaling protein/membrane protein
Chain: A: PDB Molecule:protein aveugle;
PDBTitle: crystal structure of hcnk2-sam/dhyp-sam complex
22c2eanA_



not modelled 11.3 24 PDB header:signaling protein
Chain: A: PDB Molecule:connector enhancer of kinase suppressor of ras 2;
PDBTitle: solution structure of the n-terminal sam-domain of human2 kiaa0902 protein (connector enhancer of kinase suppressor3 of ras 2)
23d1hmja_



not modelled 11.2 33 Fold:RPB5-like RNA polymerase subunit
Superfamily:RPB5-like RNA polymerase subunit
Family:RPB5
24d1qrva_



not modelled 11.1 16 Fold:HMG-box
Superfamily:HMG-box
Family:HMG-box
25d3cx5g1



not modelled 10.8 28 Fold:14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Superfamily:14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Family:14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
26c2eseA_



not modelled 10.1 29 PDB header:protein/rna complex
Chain: A: PDB Molecule:vts1p;
PDBTitle: structure of the sam domain of vts1p in complex with rna
27c3bq7A_



not modelled 10.0 29 PDB header:transferase
Chain: A: PDB Molecule:diacylglycerol kinase delta;
PDBTitle: sam domain of diacylglycerol kinase delta1 (e35g)
28c2fe9A_



not modelled 9.9 31 PDB header:rna binding protein
Chain: A: PDB Molecule:protein vts1;
PDBTitle: solution structure of the vts1 sam domain in the presence2 of rna
29c2bzwB_



not modelled 9.6 50 PDB header:transcription
Chain: B: PDB Molecule:bcl2-antagonist of cell death;
PDBTitle: the crystal structure of bcl-xl in complex with full-length2 bad
30c3r0pB_



not modelled 9.6 15 PDB header:hydrolase
Chain: B: PDB Molecule:l-psp putative endoribonuclease;
PDBTitle: crystal structure of l-psp putative endoribonuclease from uncultured2 organism
31d1ucva_



not modelled 9.0 12 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
32d1kw4a_



not modelled 9.0 13 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
33d1ddfa_



not modelled 8.2 22 Fold:DEATH domain
Superfamily:DEATH domain
Family:DEATH domain, DD
34c2kg5A_



not modelled 8.2 24 PDB header:signaling protein
Chain: A: PDB Molecule:arf-gap, rho-gap domain, ank repeat and ph
PDBTitle: nmr solution structure of arap3-sam
35c3quwA_



not modelled 8.1 12 PDB header:protein binding
Chain: A: PDB Molecule:protein mmf1;
PDBTitle: crystal structure of yeast mmf1
36c2eaoA_



not modelled 8.0 35 PDB header:signaling protein, transferase
Chain: A: PDB Molecule:ephrin type-b receptor 1;
PDBTitle: solution structure of the c-terminal sam-domain of mouse2 ephrin type-b receptor 1 precursor (ec 2.7.1.112)
37c3lmeE_



not modelled 7.9 19 PDB header:translation
Chain: E: PDB Molecule:possible translation initiation inhibitor;
PDBTitle: structure of probable translation initiation inhibitor from2 (rpa2473) from rhodopseudomonas palustris
38d1hsma_



not modelled 7.7 21 Fold:HMG-box
Superfamily:HMG-box
Family:HMG-box
39c3i7tA_



not modelled 7.7 31 PDB header:unknown function
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of rv2704, a member of highly conserved2 yjgf/yer057c/uk114 family, from mycobacterium tuberculosis
40d2d59a1



not modelled 7.4 27 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:CoA-binding domain
41c2hueB_



not modelled 7.2 56 PDB header:dna binding protein
Chain: B: PDB Molecule:histone h3;
PDBTitle: structure of the h3-h4 chaperone asf1 bound to histones h3 and h4
42c3nquA_



not modelled 7.0 44 PDB header:dna binding protein
Chain: A: PDB Molecule:histone h3-like centromeric protein a;
PDBTitle: crystal structure of partially trypsinized (cenp-a/h4)2 heterotetramer
43c2qkqA_



not modelled 6.9 35 PDB header:transferase
Chain: A: PDB Molecule:ephrin type-b receptor 4;
PDBTitle: structure of the sam domain of human ephrin type-b receptor2 4
44d1eika_



not modelled 6.9 40 Fold:RPB5-like RNA polymerase subunit
Superfamily:RPB5-like RNA polymerase subunit
Family:RPB5
45d1ui0a_



not modelled 6.8 32 Fold:Uracil-DNA glycosylase-like
Superfamily:Uracil-DNA glycosylase-like
Family:Mug-like
46d1v38a_



not modelled 6.7 12 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
47d1ulqa1



not modelled 6.7 27 Fold:Thiolase-like
Superfamily:Thiolase-like
Family:Thiolase-related
48c1g5jB_



not modelled 6.7 50 PDB header:apoptosis
Chain: B: PDB Molecule:bad protein;
PDBTitle: complex of bcl-xl with peptide from bad
49d1o4va_



not modelled 6.7 29 Fold:Flavodoxin-like
Superfamily:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
Family:N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
50d1sgga_



not modelled 6.6 27 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
51c2yfwC_



not modelled 6.5 44 PDB header:cell cycle
Chain: C: PDB Molecule:histone h3-like centromeric protein cse4;
PDBTitle: heterotetramer structure of kluyveromyces lactis cse4,h4
52d2a1ja1



not modelled 6.4 33 Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Hef domain-like
53d1w7pd1



not modelled 6.4 33 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Vacuolar sorting protein domain
54c3k12F_



not modelled 6.3 38 PDB header:structural genomics, unknown function
Chain: F: PDB Molecule:uncharacterized protein a6v7t0;
PDBTitle: crystal structure of an uncharacterized protein a6v7t0 from2 pseudomonas aeruginosa
55d1dzfa2



not modelled 6.3 33 Fold:RPB5-like RNA polymerase subunit
Superfamily:RPB5-like RNA polymerase subunit
Family:RPB5
56c3kowH_



not modelled 6.1 47 PDB header:metal binding protein
Chain: H: PDB Molecule:d-ornithine aminomutase s component;
PDBTitle: crystal structure of ornithine 4,5 aminomutase backsoaked complex
57d1dhsa_



not modelled 6.1 21 Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Deoxyhypusine synthase, DHS
58c2a8vA_



not modelled 6.0 27 PDB header:protein/rna
Chain: A: PDB Molecule:rna binding domain of rho transcription
PDBTitle: rho transcription termination factor/rna complex
59d1x40a1



not modelled 6.0 27 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
60d1k99a_



not modelled 6.0 19 Fold:HMG-box
Superfamily:HMG-box
Family:HMG-box
61c2eqzA_



not modelled 6.0 14 PDB header:transcription
Chain: A: PDB Molecule:high mobility group protein b3;
PDBTitle: solution structure of the first hmg-box domain from high2 mobility group protein b3
62c2gleA_



not modelled 5.9 29 PDB header:protein binding
Chain: A: PDB Molecule:neurabin-1;
PDBTitle: solution structure of neurabin sam domain
63c3nqjA_



not modelled 5.8 44 PDB header:dna binding protein
Chain: A: PDB Molecule:histone h3-like centromeric protein a;
PDBTitle: crystal structure of (cenp-a/h4)2 heterotetramer
64c2l5aA_



not modelled 5.8 56 PDB header:nuclear protein
Chain: A: PDB Molecule:histone h3-like centromeric protein cse4, protein scm3,
PDBTitle: structural basis for recognition of centromere specific histone h32 variant by nonhistone scm3
65c2b6gA_



not modelled 5.8 29 PDB header:rna binding protein
Chain: A: PDB Molecule:vts1p;
PDBTitle: rna recognition by the vts1 sam domain
66d2gzka2



not modelled 5.7 26 Fold:HMG-box
Superfamily:HMG-box
Family:HMG-box
67c1hrzA_



not modelled 5.7 26 PDB header:dna binding protein/dna
Chain: A: PDB Molecule:human sry;
PDBTitle: the 3d structure of the human sry-dna complex solved by2 multi-dimensional heteronuclear-edited and-filtered nmr
68c1hryA_



not modelled 5.7 26 PDB header:dna binding protein/dna
Chain: A: PDB Molecule:human sry;
PDBTitle: the 3d structure of the human sry-dna complex solved by2 multid-dimensional heteronuclear-edited and-filtered nmr
69c3gtzA_



not modelled 5.7 30 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative translation initiation inhibitor;
PDBTitle: crystal structure of a putative translation initiation inhibitor from2 salmonella typhimurium
70d1wuda1



not modelled 5.7 17 Fold:SAM domain-like
Superfamily:HRDC-like
Family:HRDC domain from helicases
71c2e8nA_



not modelled 5.7 35 PDB header:transferase, signaling protein
Chain: A: PDB Molecule:ephrin type-a receptor 2;
PDBTitle: solution structure of the c-terminal sam-domain of ephaa2:2 ephrin type-a receptor 2 precursor (ec 2.7.10.1)
72d1a62a2



not modelled 5.6 27 Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
73c3h8mB_



not modelled 5.5 17 PDB header:transferase
Chain: B: PDB Molecule:ephrin type-a receptor 7;
PDBTitle: sam domain of human ephrin type-a receptor 7 (epha7)
74d1j46a_



not modelled 5.5 25 Fold:HMG-box
Superfamily:HMG-box
Family:HMG-box
75c2dl0A_



not modelled 5.4 20 PDB header:signaling protein
Chain: A: PDB Molecule:sam and sh3 domain-containing protein 1;
PDBTitle: solution structure of the sam-domain of the sam and sh32 domain containing protein 1
76c2dyyG_



not modelled 5.4 35 PDB header:structural genomics, unknown function
Chain: G: PDB Molecule:upf0076 protein ph0854;
PDBTitle: crystal structure of putative translation initiation2 inhibitor ph0854 from pyrococcus horikoshii
77c3v4dC_



not modelled 5.3 31 PDB header:oxidoreductase
Chain: C: PDB Molecule:aminoacrylate peracid reductase rutc;
PDBTitle: crystal structure of rutc protein a member of the yjgf family from2 e.coli
78c1pk1A_



not modelled 5.3 13 PDB header:transcription repression
Chain: A: PDB Molecule:polyhomeotic-proximal chromatin protein;
PDBTitle: hetero sam domain structure of ph and scm.
79d1pk1c1



not modelled 5.2 13 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
80d1coka_



not modelled 5.2 24 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
81d1mz4a_



not modelled 5.1 17 Fold:Cytochrome c
Superfamily:Cytochrome c
Family:monodomain cytochrome c
82d1b0xa_



not modelled 5.1 29 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
83c1b0xA_



not modelled 5.1 29 PDB header:transferase
Chain: A: PDB Molecule:protein (epha4 receptor tyrosine kinase);
PDBTitle: the crystal structure of an eph receptor sam domain reveals2 a mechanism for modular dimerization.
84d1gt0d_



not modelled 5.1 26 Fold:HMG-box
Superfamily:HMG-box
Family:HMG-box
85d1j7ha_



not modelled 5.1 26 Fold:Bacillus chorismate mutase-like
Superfamily:YjgF-like
Family:YjgF/L-PSP
86d1icha_



not modelled 5.0 21 Fold:DEATH domain
Superfamily:DEATH domain
Family:DEATH domain, DD