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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2023 Jan 21

Fold library idPDB HeaderMoleculeTitle
c8hdsl_ 3.57 viral protein Chain: L: pam3 portal protein;
c7xclA_ 2.50 transferase Chain: A: trimethylamine methyltransferase;
c8b9zb_ 3.28 oxidoreductase Chain: B: ld31474p;
c8hdoR_ 2.87 membrane protein Chain: R: adenosine a2b receptor;
c8dwtE_ 6.20 oncoprotein Chain: E: speckle-type poz protein;
c8bc2B_ 2.60 transferase Chain: B: transaldolase;
c8hw1G_ 3.13 photosynthesis Chain: G: far-red light-harvesting complex;
c7zqaM_ 3.60 virus like particle Chain: M: velcrovax tandem hbcag with sumo-affimer inserted at mir;
c7qtfA_ 1.55 biosynthetic protein Chain: A: plao1;
c7pqhF_ UNK Blank PDB header PDB COMPND:
c8audB_ 4.50 cell cycle Chain: B: cell wall-associated hydrolases (invasion-associated
c8hdtN_ 3.17 viral protein Chain: N: major capsid;
c8ba0W_ 3.68 oxidoreductase Chain: W: nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
c8hubD_ 3.25 hydrolase Chain: D: amp deaminase 2;
c7xsfA_ 2.01 hydrolase Chain: A: alpha-l-fucosidase;
c7yq1B_ 1.91 transferase Chain: B: adenylyl-sulfate kinase;
c8c5iO_ 3.15 hydrolase Chain: O: cyanide dihydratase;
c7y4lA_ UNK Blank PDB header PDB COMPND:
c7zchA_ 3.60 cytosolic protein Chain: A: charged multivesicular body protein 3;
c7xcnP_ 2.70 transferase Chain: P: trimethylamine methyltransferase corrinoid protein;
c7uuwI_ 3.36 cell adhesion Chain: I: alpha-catenin-like protein hmp-1;
c8aucB_ 3.50 cell cycle Chain: B: cell wall-associated hydrolases (invasion-associated
c8hdtG_ 3.17 viral protein Chain: G: cement;
c8b9zQ_ 3.28 oxidoreductase Chain: Q: nadh dehydrogenase [ubiquinone] iron-sulfur protein 4,
c8ba0r_ 3.68 oxidoreductase Chain: R: nadh dehydrogenase [ubiquinone] iron-sulfur protein 6,
c8eazB_ 3.08 ligase Chain: B: ranbp-type and c3hc4-type zinc finger-containing protein 1;
c8f1bA_ 2.41 metal binding protein Chain: A: zinc-binding protein;
c7qprB_ 2.51 hydrolase Chain: B: act domain protein;
c8ba0J_ 3.68 oxidoreductase Chain: J: nadh-ubiquinone oxidoreductase chain 6;
c8ba0O_ 3.68 oxidoreductase Chain: O: nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
c8hdsG_ 3.57 viral protein Chain: G: pam3 portal protein;
c8b9zM_ 3.28 oxidoreductase Chain: M: nadh-ubiquinone oxidoreductase chain 4;
c7x7iB_ 1.55 oxidoreductase Chain: B: fad dependent enzyme;
c8ba0A_ 3.68 oxidoreductase Chain: A: nadh-ubiquinone oxidoreductase chain 3;
c7y4lW_ UNK Blank PDB header PDB COMPND:
c8b9zi_ 3.28 oxidoreductase Chain: I: nadh dehydrogenase (ubiquinone) 23 kda subunit;
c8hdwT_ 3.00 viral protein Chain: T: pam3 sheath protein;
c7ur2E_ 1.89 lipid binding protein Chain: E: isoform 7 of kalirin;
c8hdwn_ 3.00 viral protein Chain: N: pam3 sheath protein;
c7yfzS_ UNK Blank PDB header PDB COMPND:
c7ye2E_ 3.80 transcription Chain: E: dna-directed rna polymerase subunit omega;
c7r5mL_ 3.30 transferase Chain: L: dihydrolipoyllysine-residue acetyltransferase component of
c7u7hC_ 2.90 transferase Chain: C: 7-keto-8-aminopelargonate synthetase-like enzyme;
c7yfzP_ UNK Blank PDB header PDB COMPND:
c7wjuB_ 2.69 rna binding protein/rna/dna Chain: B: orfb_zn_ribbon domain-containing protein;
c7y4lB_ UNK Blank PDB header PDB COMPND:
c7pqhK_ UNK Blank PDB header PDB COMPND:
c8h7aF_ 1.92 dna binding protein/dna Chain: F: histone acetyltransferase kat6a;
c8b9zq_ 3.28 oxidoreductase Chain: Q: nadh dehydrogenase [ubiquinone] iron-sulfur protein 4,
c8f8zA_ 3.30 oxidoreductase/transferase Chain: A: lysine-specific demethylase phf2;
c8ad2B_ 2.00 sugar binding protein Chain: B: nictaba;
c8h8cC_ 3.36 toxin Chain: C: c-terminal peptide from putative rhs-family protein;
c7y4lX_ UNK Blank PDB header PDB COMPND:
c7yimA_ 2.60 metal binding protein Chain: A: alpha-fetoprotein;
c7y4lK_ UNK Blank PDB header PDB COMPND:
c7yfwa_ 3.96 viral protein Chain: A:
c8ba0K_ 3.68 oxidoreductase Chain: K: nadh-ubiquinone oxidoreductase chain 4l;
c7xsgA_ 1.61 hydrolase Chain: A: alpha-l-fucosidase;
c7qpkA_ UNK Blank PDB header PDB COMPND:
c8ba0o_ 3.68 oxidoreductase Chain: O: nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
c8ba0n_ 3.68 oxidoreductase Chain: N: nadh-ubiquinone oxidoreductase chain 2;
c7p3pA_ UNK viral protein Chain: A: gag polyprotein;
c7wjuA_ 2.69 rna binding protein/rna/dna Chain: A: orfb_zn_ribbon domain-containing protein;
c8b9zG_ 3.28 oxidoreductase Chain: G: nadh-ubiquinone oxidoreductase 75 kda subunit,
c8ba0e_ 3.68 oxidoreductase Chain: E: nadh dehydrogenase (ubiquinone) 24 kda subunit, isoform a;
c7qoxD_ 2.32 blood clotting Chain: D: kininogen-1 light chain;
c8hbrF_ 2.20 structural protein Chain: F: tog domain-containing protein;
c8hubA_ 3.25 hydrolase Chain: A: amp deaminase 2;
c7qqjA_ 2.05 transferase Chain: A: sucrose phosphorylase;
c8b9zm_ 3.28 oxidoreductase Chain: M: nadh-ubiquinone oxidoreductase chain 4;
c7ye1A_ 3.70 transcription Chain: A: dna-directed rna polymerase subunit alpha;
c8h26B_ 1.50 transferase Chain: B: 16s rrna (cytosine(1402)-n(4))-methyltransferase;
c7ye1D_ 3.70 transcription Chain: D: dna-directed rna polymerase subunit beta';
c7qugB_ 2.60 lyase Chain: B: carbon-sulfur lyase fnapatb1;
c8hhiA_ 1.40 biosynthetic protein Chain: A: human collagen type iii;
c8b9zX_ 3.28 oxidoreductase Chain: X: nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
c7t9rC_ 1.45 antimicrobial protein Chain: C: cpobd13;
c7r5mB_ 3.30 transferase Chain: B: dihydrolipoyllysine-residue acetyltransferase component of
c8b9zf_ 3.28 oxidoreductase Chain: F: nadh dehydrogenase [ubiquinone] flavoprotein 1,
c8ba0j_ 3.68 oxidoreductase Chain: J: nadh-ubiquinone oxidoreductase chain 6;
c8b71B_ 3.80 membrane protein Chain: B: apc family permease;
c8b9zP_ 3.28 oxidoreductase Chain: P: nadh dehydrogenase (ubiquinone) 39 kda subunit, isoform a;
c8ba0k_ 3.68 oxidoreductase Chain: K: nadh-ubiquinone oxidoreductase chain 4l;
c8gnaA_ 2.80 rna binding protein Chain: A: ramp superfamily protein;
c7uekA_ 2.10 de novo protein Chain: A: ot3;
c8b9zL_ 3.28 oxidoreductase Chain: L: nadh-ubiquinone oxidoreductase chain 5;
c8h8cB_ 3.36 toxin Chain: B: putative rhs-family protein;
c7yfzM_ UNK Blank PDB header PDB COMPND:
c8d4aA_ 2.74 dna binding protein/rna/dna Chain: A: orfb_zn_ribbon domain-containing protein;
c8hduB_ 2.71 de novo protein Chain: B: de novo design cavitated protein;
c8hhkI_ 2.50 cell adhesion Chain: I: pro-hyp-gly-pro-hyp-gly-pro-hyp-gly-phe-asp-gly-arg-asn-
c7yi9A_ 2.60 dna binding protein Chain: A: mta9;
c7qqdA_ 2.70 dna binding protein Chain: A: nuclear factor 1 x-type;
c7qrhA_ UNK Blank PDB header PDB COMPND:
c7w5lA_ 2.50 oxidoreductase Chain: A: l-sorbosone dehydrogenase, nad(p) dependent;
c8ba0a_ 3.68 oxidoreductase Chain: A: nadh-ubiquinone oxidoreductase chain 3;
c8b9zh_ 3.28 oxidoreductase Chain: H: nadh-ubiquinone oxidoreductase chain 1;
c7qotC_ 3.24 blood clotting Chain: C: kininogen-1 light chain;
c7xwtB_ 1.76 lyase Chain: B: feruloyl-coa hydratase/lyase;
c8ba0g_ 3.68 oxidoreductase Chain: G: nadh-ubiquinone oxidoreductase 75 kda subunit,
c8ba0p_ 3.68 oxidoreductase Chain: P: nadh dehydrogenase (ubiquinone) 39 kda subunit, isoform a;
c7pqhJ_ UNK Blank PDB header PDB COMPND:
c7twdA_ 2.11 chaperone Chain: A: alpha- and gamma-adaptin-binding protein p34;
c8hhkB_ 2.50 cell adhesion Chain: B: pro-hyp-gly-pro-hyp-gly-pro-hyp-gly-phe-asp-gly-arg-asn-
c7ye1C_ 3.70 transcription Chain: C: dna-directed rna polymerase subunit beta;
c8b9zl_ 3.28 oxidoreductase Chain: L: nadh-ubiquinone oxidoreductase chain 5;
c7qp3A_ 1.85 recombination Chain: A: extracellular metalloproteinase;
c7r5mM_ 3.30 transferase Chain: M: pyruvate dehydrogenase x component;
c8hhkH_ 2.50 cell adhesion Chain: H: pro-hyp-gly-pro-hyp-gly-pro-hyp-gly-phe-asp-gly-arg-asn-
c8b9zZ_ 3.28 oxidoreductase Chain: Z: nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
c7tjbA_ 1.30 transferase Chain: A: peptidoglycan o-acetyltransferase b;
c7qqiA_ 1.36 transferase Chain: A: aamy domain-containing protein;
c7y4lU_ UNK Blank PDB header PDB COMPND:
c8hhiB_ 1.40 biosynthetic protein Chain: B: human collagen type iii;
c8b9zd_ 3.28 oxidoreductase Chain: D: complex i-49kd;
c8ba0Y_ 3.68 oxidoreductase Chain: Y: nadh dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
c8ba0s_ 3.68 oxidoreductase Chain: S:
c7ye2F_ 3.80 transcription Chain: F: rna polymerase sigma factor rpod;
c7qplA_ 1.77 hydrolase Chain: A: o-phosphoserine phosphohydrolase;
c8b9zH_ 3.28 oxidoreductase Chain: H: nadh-ubiquinone oxidoreductase chain 1;
c7y4lM_ UNK Blank PDB header PDB COMPND:
c8hhiC_ 1.40 biosynthetic protein Chain: C: human collagen type iii;
c8eb0A_ 3.03 ligase Chain: A: e3 ubiquitin-protein ligase rnf216;
c8hdvB_ 2.65 de novo protein Chain: B: de novo design cavitated protein;
c8h8bA_ 3.16 toxin Chain: A: putative rhs-family protein;
c7x8qD_ 2.65 signaling protein Chain: D: frizzled-10;
c7tb9A_ UNK de novo protein Chain: A: peptide from cementoblastoma-derived protein 1;
c7twdB_ 2.11 chaperone Chain: B: alpha- and gamma-adaptin-binding protein p34;
c7zcgB_ 3.30 cytosolic protein Chain: B: charged multivesicular body protein 2a;
c8ba0R_ 3.68 oxidoreductase Chain: R: nadh dehydrogenase [ubiquinone] iron-sulfur protein 6,
c7z87A_ 2.91 dna binding protein Chain: A: dna-dependent protein kinase catalytic subunit;
c8hhkG_ 2.50 cell adhesion Chain: G: pro-hyp-gly-pro-hyp-gly-pro-hyp-gly-phe-asp-gly-arg-asn-
c8booA_ UNK structural protein Chain: A: semenogelin-1;
c8asbA_ 3.60 viral protein Chain: A: rna-dependent rna-polymerase l protein;
c8b9zN_ 3.28 oxidoreductase Chain: N: nadh-ubiquinone oxidoreductase chain 2;
c7z88A_ 3.33 dna binding protein Chain: A: dna-dependent protein kinase catalytic subunit;
c7ye1G_ 3.70 transcription Chain: G: cell cycle regulatory protein gcra;
c8hhkC_ 2.50 cell adhesion Chain: C: pro-hyp-gly-pro-hyp-gly-pro-hyp-gly-phe-asp-gly-arg-asn-
c7y4lE_ UNK Blank PDB header PDB COMPND:
c8au6A_ 2.00 cell cycle Chain: A: regulatory protein cg1604;
c7pqhH_ UNK Blank PDB header PDB COMPND:
c8b9zV_ 3.28 oxidoreductase Chain: V: nadh dehydrogenase (ubiquinone) 13 kda b subunit;


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