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 Protein Homology/analogY Recognition Engine V 2.0


New fold library entries added 2016 Apr 30

Fold library idPDB HeaderMoleculeTitle
c5d4zF_ 2.98 dna binding protein Chain: F: repressor;
c5hoeB_ 1.45 hydrolase Chain: B: hydrolase;
c2n7rA_ UNK membrane protein Chain: A: nicastrin;
c5ijoI_ 21.40 transport protein Chain: I: nuclear pore complex protein nup93;
c5ijnF_ 21.40 transport protein Chain: F: nuclear pore complex protein nup54;
c5ijjB_ 1.95 inositol polyphosphate binding protein Chain: B: spx domain;
c5jg7A_ 1.70 metal transport Chain: A: fur regulated salmonella iron transporter;
c4zhwA_ 1.39 signaling protein Chain: A: yfib;
c5ef4A_ 2.05 allergen Chain: A: cysteine protease;
c5hssA_ 2.50 lyase Chain: A: linalool dehydratase/isomerase;
c5eoxB_ 2.40 peptide binding protein Chain: B: type 4 fimbrial biogenesis protein pilm;
c5azdA_ 2.80 transport protein Chain: A: bacteriorhodopsin;
c5j8rC_ 2.04 hydrolase Chain: C: tyrosine-protein phosphatase non-receptor type 12;
c5ctqD_ 2.60 immune system, nuclear protein, rna bind Chain: D: squamous cell carcinoma antigen recognized by t-cells 3;
c5ijnD_ 21.40 transport protein Chain: D: nuclear pore complex protein nup205;
c5fykV_ 3.11 viral protein Chain: V: vrc01;
c4zwnD_ 2.49 hydrolase Chain: D: monoglyceride lipase;
c5fnpB_ 1.80 oxidoreductase Chain: B: iron-sulfur cluster repair protein ytfe;
c5hr4J_ 2.60 hydrolase/dna Chain: J: mmei;
c5apgA_ 1.60 transferase Chain: A: tsr3;
c5iecA_ UNK blood clotting Chain: A: raci2;
c5ap8A_ 2.25 transferase Chain: A: tsr3;
c5b26B_ 2.60 signaling protein Chain: B: protein sel-1 homolog 1;
c4uj8D_ 1.70 membrane protein Chain: D: surface layer protein;
c5ijnT_ 21.40 transport protein Chain: T: nuclear pore glycoprotein p62;
c5ff5A_ 2.93 transferase Chain: A: paaa;
c5fyjU_ 3.11 viral protein Chain: U: vrc01;
c5d50E_ 2.49 dna binding protein Chain: E: anti-repressor protein;
c5bxxA_ 2.00 lyase Chain: A: l-ectoine synthase;
c5ihyB_ 2.50 hydrolase Chain: B: uncharacterized protein;
c5h93C_ 2.18 hydrolase Chain: C: geobacter metallireducens smug1;
c5i9fA_ 2.19 rna binding protein/rna Chain: A: pentatricopeptide repeat protein dppr-u10;
c5cxxC_ 1.55 hydrolase Chain: C: ferulic acid esterase, amce1/fae1a;
c5ey5A_ 1.97 lyase Chain: A: lbcats-a;
c5ijnS_ 21.40 transport protein Chain: S: nuclear pore complex protein nup58;
c5d50I_ 2.49 dna binding protein Chain: I: repressor;
c5fvkC_ 1.66 hydrolase Chain: C: vps4-associated protein 1;
c5ijhA_ 2.43 inositol phosphate binding protein Chain: A: xenotropic and polytropic retrovirus receptor 1;
c5j8nA_ 1.44 hydrolase Chain: A: exodeoxyribonuclease iii;
c5iiqA_ 3.03 transferase Chain: A: vacuolar transporter chaperone 4;
c5c1sB_ 3.10 hydrolase Chain: B: small gtpase ehrabx3;
c5enzA_ 1.91 isomerase Chain: A: udp-glcnac 2-epimerase;
c4zgwB_ 1.47 oxidoreductase Chain: B: short-chain dehydrogenase/reductase;
c5c2zA_ 1.96 toxin Chain: A: exfoliative toxin d2;
c5hyzA_ 1.82 transcription factor Chain: A: gras family transcription factor containing protein,
c5j7mB_ 2.07 structural genomics, unknown function Chain: B: cupin 2 conserved barrel domain protein;
c5i6cB_ 3.70 transport protein Chain: B: uric acid-xanthine permease;
c5jcvA_ 2.23 hydrolase Chain: A: lmo2181 protein;
c5fx0A_ 2.30 cell adhesion Chain: A: calcium binding protein;
c5egwA_ 2.70 allergen Chain: A: cysteine protease;
c4zhvB_ 1.59 signaling protein Chain: B: yfib;
c2n22B_ UNK transcription Chain: B: transcription factor p65;
c5ftzA_ 1.38 lyase Chain: A: chitin binding protein;
c5iitC_ 2.13 inositol phosphate binding protein Chain: C: vacuolar transporter chaperone 4,core histone macro-h2a.1;
c4ys2A_ 1.97 immune system Chain: A: na+/h+ antiporter-like protein;
c5e9fD_ 2.80 lyase Chain: D: isocitrate lyase;
c5fvkD_ 1.66 hydrolase Chain: D: vps4-associated protein 1;
c5iwaV_ 3.50 transcription Chain: V: 30s ribosomal protein thx;
c5fvlC_ 1.97 viral protein Chain: C: vacuolar protein sorting-associated protein 20;
c5ijpA_ 2.75 inositol phosphate binding protein Chain: A: putative uncharacterized protein;
c5j8eB_ 1.70 protein transport Chain: B: protein hook homolog 3;
c2n2sA_ UNK signaling protein Chain: A: pheromone ep-1;
c5fztB_ 2.10 structural protein Chain: B: rho gtpase-activating protein 7;
c5ijoJ_ 21.40 transport protein Chain: J: nucleoporin nup188 homolog;
c5id6A_ 2.38 hydrolase Chain: A: cpf1;
c5fvlD_ 1.97 viral protein Chain: D: vacuolar protein sorting-associated protein 20;

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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