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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2016 Mar 12

Fold library idPDB HeaderMoleculeTitle
c5fmrC_ 2.00 transport protein Chain: C: intraflagellar transport protein component ift52;
c4yk1A_ 2.10 protein binding Chain: A: bartonella effector protein (bep) substrate of virb t4ss;
c4d65F_ 2.20 transport protein Chain: F: porin 2;
c3jcr7_ 7.00 splicing Chain: 7: lsm7;
c3jbhA_ 20.00 contractile protein Chain: A: myosin 2 heavy chain striated muscle;
c5ajsC_ 2.30 transcription Chain: C: thap domain-containing protein 11;
c5garX_ 6.40 hydrolase Chain: X: vacuolar type atp synthase subunit;
c4y4nE_ 2.10 biosynthetic protein Chain: E: putative ribose 1,5-bisphosphate isomerase;
c5f34A_ 3.28 transferase Chain: A: phosphatidylinositol mannoside acyltransferase;
c4y98A_ 2.65 oxidoreductase Chain: A: c alpha-dehydrogenase;
c5hdtA_ 2.71 cell cycle Chain: A: sister chromatid cohesion protein pds5 homolog b;
c5fugI_ 2.70 dna binding protein Chain: I: vacuolar protein sorting-associated protein 72 homolog;
c4z1bA_ 2.40 transferase Chain: A: 2-dehydro-3-deoxyphosphooctonate aldolase;
c3jbhI_ 20.00 contractile protein Chain: I: myosin 2 essential light chain striated muscle;
c5hsaG_ 2.35 oxidoreductase Chain: G: alcohol oxidase 1;
c5ibxB_ 1.65 isomerase Chain: B: triosephosphate isomerase;
c4yddF_ 1.86 oxidoreductase Chain: F: dmso reductase family type ii enzyme, iron-sulfur subunit;
c5f4bB_ 2.50 oxidoreductase Chain: B: nad(p)h dehydrogenase (quinone);
c4yb5B_ 2.24 transferase Chain: B: atp phosphoribosyltransferase;
c5iduB_ 1.95 oxidoreductase Chain: B: acyl-coa dehydrogenase domain protein;
c3jcrC_ 7.00 splicing Chain: C: hbrr2;
c5d1pB_ 2.20 ligase Chain: B: atp-dependent rna ligase;
c4yc5A_ 1.76 structural protein Chain: A: beta1;
c4xe7A_ 2.00 structural protein Chain: A: uncharacterized protein;
c4yk3B_ 2.20 protein binding Chain: B: bepe protein;
c3jcr6_ 7.00 splicing Chain: 6: lsm6;
c5hj0C_ 2.64 ligase Chain: C: kinetochore protein mis18;
c5febA_ 1.35 membrane protein Chain: A: sodium channel subunit beta-2;
c4ye7A_ 1.40 viral protein Chain: A: orf22 similar to xcgv orf19;
c5hm5A_ 2.40 isomerase Chain: A: topoisomerase v;
c3jcr5_ 7.00 splicing Chain: 5: lsm5;
c5d0qC_ 3.50 protein transport Chain: C: outer membrane protein assembly factor bamc;
c2nabA_ UNK transcription Chain: A: zinc finger protein 496;
c5fmsA_ 3.49 transport protein Chain: A: intraflagellar transport protein 52 homolog;
c5bp2A_ 1.75 lyase Chain: A: mycocerosic acid synthase;
c5gasN_ 9.50 hydrolase Chain: N: archaeal/vacuolar-type h+-atpase subunit i;
c4yaiB_ 1.60 oxidoreductase Chain: B: c alpha-dehydrogenase;
c5ch7E_ 2.20 oxidoreductase Chain: E: dmso reductase family type ii enzyme, molybdopterin
c4wy9A_ 1.40 signaling protein Chain: A: putative mcp-type signal transduction protein;
c5da1B_ 2.75 hydrolase Chain: B: endoribonuclease;
c5btsA_ 1.77 hormone Chain: A: insulin a chain;
c5bukA_ 1.95 oxidoreductase Chain: A: fadh2-dependent halogenase;
c4yk2B_ 2.05 protein binding Chain: B: bartonella effector protein (bep) substrate of virb t4ss;
c5bp1A_ 2.20 transferase Chain: A: mycocerosic acid synthase;
c5hvcA_ UNK transferase Chain: A: type i modular polyketide synthase;
c3jcrA_ 7.00 splicing Chain: A: hprp8;
c3jcrL_ 7.00 splicing Chain: L: hprp4;
c5aooB_ UNK virus Chain: B: vp1;
c4yn5A_ 1.80 hydrolase Chain: A: mannan endo-1,4-beta-mannosidase;
c5ek5A_ 2.26 unknown function Chain: A: irma;
c3jcr8_ 7.00 splicing Chain: 8: lsm8;
c5ak1A_ 2.64 hydrolase Chain: A: carbohydrate binding family 6;
c4xg1C_ 2.50 lyase Chain: C: diaminopimelate decarboxylase;
c5hd9A_ 1.94 viral protein Chain: A: encapsidation protein;
c5egeD_ 2.00 hydrolase Chain: D: ectonucleotide pyrophosphatase/phosphodiesterase family
c5chlA_ 1.89 chaperone Chain: A: vacuolar protein sorting-associated protein 72 homolog;
c4z2mB_ 2.98 transcription/dna binding protein Chain: B: fact complex subunit spt16;
c5bulA_ 1.98 hydrolase Chain: A: flavin-dependent halogenase triple mutant;
c3jcr2_ 7.00 splicing Chain: 2: lsm2;
c5hnoC_ 1.70 transport protein Chain: C: abc type transport system putative atp binding protein;
c2n11A_ UNK motor protein,protein transport Chain: A: unconventional myosin-vi;
c3jcrG_ 7.00 splicing Chain: G: hprp6;
c3jcrD_ 7.00 splicing Chain: D: u5-40k;
c5hh7A_ 1.90 transcription Chain: A: origin of replication complex subunit 1b;
c5iaiA_ 1.60 solute-binding protein Chain: A: sugar abc transporter;
c5d0qG_ 3.50 protein transport Chain: G: outer membrane protein assembly factor bamc;
c5aiwA_ UNK cell adhesion Chain: A: trah;
c5aooA_ UNK virus Chain: A: vp0;
c3jcrV_ 7.00 splicing Chain: V: hsad1;
c3jcrK_ 7.00 splicing Chain: K: hprp3;
c5fmtB_ 1.88 protein transport Chain: B: flagellar associated protein;
c3jcr4_ 7.00 splicing Chain: 4: lsm4;
c2naaA_ UNK transcription Chain: A: histone-lysine n-methyltransferase, h3 lysine-36 and h4
c5aooC_ UNK virus Chain: C: vp3;
c5eulE_ 3.70 protein transport Chain: E: preprotein translocase sece subunit;
c4yn3B_ 1.95 hydrolase Chain: B: cucumisin;
c3jcrB_ 7.00 splicing Chain: B: hsnu114;
c4xhpA_ 3.20 structural protein Chain: A: parm hybrid fusion protein;
c4yacA_ 1.70 oxidoreductase Chain: A: c alpha-dehydrogenase;
c3jcr3_ 7.00 splicing Chain: 3: lsm3;
c5i1mV_ 7.00 membrane protein Chain: V: v-type proton atpase subunit a, vacuolar isoform;
c2mtbA_ UNK electron transport Chain: A: flavodoxin-2;
c5eulY_ 3.70 protein transport Chain: Y: protein translocase subunit secy;


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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