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 Protein Homology/analogY Recognition Engine V 2.0


New fold library entries added 2016 Jan 30

Fold library idPDB HeaderMoleculeTitle
c2na6A_ UNK apoptosis Chain: A: tumor necrosis factor receptor superfamily member 6;
c5hm8C_ 2.85 hydrolase Chain: C: adenosylhomocysteinase;
c5e84B_ 2.99 chaperone Chain: B: 78 kda glucose-regulated protein;
c5fshA_ 2.30 hydrolase Chain: A: csm6;
c5apqC_ 2.10 structural protein Chain: C: general control protein gcn4;
c5ganD_ 3.60 transcription Chain: D: spliceosomal protein dib1;
c5hasA_ 2.65 protein transport Chain: A: sec7;
c4yakD_ 2.46 ligase Chain: D: beta subunit of acyl-coa synthetase (ndp forming);
c4s37F_ 2.20 metal binding protein Chain: F: phage baseplate protein;
c5gank_ 3.60 transcription Chain: K: 13 kda ribonucleoprotein-associated protein;
c5appB_ 2.30 membrane protein Chain: B: general control protein gcn4, outer membrane protein 100;
c5gaol_ 3.60 transcription Chain: L:
c5foeA_ 1.98 transferase Chain: A: gdp-fucose protein o-fucosyltransferase 2,
c5butG_ 5.97 membrane protein Chain: G: ktr system potassium uptake protein a,ktr system potassium
c4yjxB_ 2.55 protein binding Chain: B: atp-dependent clp protease adapter protein clps 2;
c5cdhE_ 2.00 hydrolase/hydrolase inhibitor Chain: E: major acid phosphatase;
c4yajA_ 2.20 ligase Chain: A: alpha subunit of acetyl-coenzyme a synthetase
c4rqmC_ 1.75 protein binding Chain: C: protein bicaudal c homolog 1;
c5azcA_ 1.90 transferase Chain: A: prolipoprotein diacylglyceryl transferase;
c4xnnA_ 1.90 hydrolase Chain: A: cellobiohydrolase chbi;
c4xhyA_ 1.53 oxidoreductase Chain: A: flavin reductase domain protein, fmn-binding protein;
c5ganm_ 3.60 transcription Chain: M:
c5af3A_ 1.78 dna binding Chain: A: vapbc49;
c4xsbB_ 2.20 transferase Chain: B: daunorubicin-doxorubicin polyketide synthase;
c5eq4B_ 2.30 sugar binding protein Chain: B: platelet-binding glycoprotein;
c4x9xA_ 1.20 transferase Chain: A: degv domain-containing protein mw1315;
c5b0aA_ 2.10 lyase Chain: A: olivetolic acid cyclase;
c5dkyA_ 1.60 hydrolase Chain: A: alpha glucosidase-like protein;
c5ar1A_ 2.85 cell cycle Chain: A: cell division control protein 11;
c5ganF_ 3.60 transcription Chain: F: pre-mrna-processing factor 31;
c5ayvB_ 1.65 oxidoreductase Chain: B: 2-dehydropantoate 2-reductase;
c4zv5B_ 1.57 viral protein Chain: B: matrix protein p10;
c2mxnA_ UNK protein binding Chain: A: mono-cysteine glutaredoxin;
c4xrkA_ 3.25 transport protein Chain: A: importin beta;
c2na7C_ UNK apoptosis Chain: C: tumor necrosis factor receptor superfamily member 6;
c5fnoB_ 2.04 oxidoreductase Chain: B: manganese lipoxygenase;
c5hl8B_ 1.93 protein transport Chain: B: type ii secretion system protein l;
c5ganp_ 3.60 transcription Chain: P:
c5ewpA_ 1.80 protein binding Chain: A: aro (armadillo repeats only protein);
c5ganH_ 3.60 transcription Chain: H: u4/u6 small nuclear ribonucleoprotein prp4;
c2myfA_ UNK rna binding protein Chain: A: rrm containing cyclophilin;
c5gapG_ 3.60 transcription Chain: G: u4/u6 small nuclear ribonucleoprotein prp3;
c5gadd_ 3.70 ribosome Chain: D: 50s ribosomal protein l3;
c5gagd_ 3.80 ribosome Chain: D: 50s ribosomal protein l3;
c4ybfA_ 1.24 hydrolase Chain: A: candidapepsin-2;
c4xriA_ 2.05 transport protein Chain: A: putative uncharacterized protein;
c5gahd_ 3.80 ribosome Chain: D: 50s ribosomal protein l3;
c5ganr_ 3.60 transcription Chain: R:
c4ylyB_ 2.25 hydrolase Chain: B: peptidyl-trna hydrolase;
c5ganJ_ 3.60 transcription Chain: J: pre-mrna-splicing factor 6;
c5ha4A_ 1.85 isomerase Chain: A: diaminopimelate epimerase;
c2na6C_ UNK apoptosis Chain: C: tumor necrosis factor receptor superfamily member 6;
c5gaed_ 3.33 ribosome Chain: D: 50s ribosomal protein l3;
c5bupA_ 2.25 cell adhesion Chain: A: zona pellucida sperm-binding protein 2;
c4wrnB_ 3.20 structural protein Chain: B: maltose-binding periplasmic protein,uromodulin;
c5hl6B_ 1.85 transferase Chain: B: putative gaf sensor protein;
c5c1fB_ 2.36 cell cycle Chain: B: septation protein imp2;
c2na7A_ UNK apoptosis Chain: A: tumor necrosis factor receptor superfamily member 6;
c2na6B_ UNK apoptosis Chain: B: tumor necrosis factor receptor superfamily member 6;
c5gapB_ 3.60 transcription Chain: B: pre-mrna-splicing helicase brr2;
c3jbe7_ 4.20 virus/immune system Chain: 7: nanobody vhh pvss8a;
c5dxuA_ 2.64 transferase/inhibitor Chain: A: phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic
c5ganC_ 3.60 transcription Chain: C: pre-mrna-splicing factor snu114;
c5efrA_ 2.00 cell adhesion Chain: A: bama-bamd fusion protein;
c5ganA_ 3.60 transcription Chain: A: pre-mrna-splicing factor 8;
c5gaoE_ 3.60 transcription Chain: E: snu66;
c5gaon_ 3.60 transcription Chain: N:
c5e4vA_ 2.71 viral protein Chain: A: nucleoprotein,phosphoprotein;
c5apzA_ 1.60 dna binding protein Chain: A: general control protein gcn4, nor1 tcar0761, general
c3jbg7_ 3.80 virus/immune system Chain: 7: nanobody vhh pvss21e;
c4s2uA_ 2.71 transferase Chain: A: ribose-phosphate pyrophosphokinase;
c5dyrA_ 3.00 dna binding protein Chain: A: virulence-associated protein d;
c2na7B_ UNK apoptosis Chain: B: tumor necrosis factor receptor superfamily member 6;

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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