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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2015 Dec 05

Fold library idPDB HeaderMoleculeTitle
c5cj1B_ motor protein Chain: B: gp7-myh7-(1526-1571) chimera protein; crystal structure of the coiled coil of myh7 residues 1526 to 15712 fused to gp7
c5eksB_ lyase Chain: B: 3-dehydroquinate synthase; structure of 3-dehydroquinate synthase from acinetobacter baumannii in2 complex with nad
c4zgsE_ oxidoreductase Chain: E: putative d-lactate dehydrogenase; identification of the pyruvate reductase of chlamydomonas reinhardtii
c5a8lZ_ translation Chain: Z: nascent chain; human erf1 and the hcmv nascent peptide in the translation2 termination complex
c4ud1B_ viral protein Chain: B: n protein; structure of the n terminal domain of the mers cov nucleocapsid
c4wvmB_ toxin Chain: B: stonustoxin subunit beta; stonustoxin structure
c5ecjA_ gene regulation/transcription Chain: A: pr domain zinc finger protein 14,protein cbfa2t2; crystal structure of monobody mb(s4) bound to prdm14 in complex with2 mtgr1
c4ynlB_ transcription Chain: B: heterocyst differentiation control protein; crystal structure of the hood domain of anabaena hetr in complex with2 the hexapeptide ergsgr derived from pats
c2n8aA_ transferase Chain: A: poly [adp-ribose] polymerase 1; nmr solution structure and assignments
c5e4wD_ transport protein Chain: D: signal recognition particle 43 kda protein, chloroplastic; crystal structure of cpsrp43 chromodomains 2 and 3 in complex with the2 alb3 tail
c5b0rA_ transferase Chain: A: lin0857 protein; beta-1,2-mannobiose phosphorylase from listeria innocua - beta-1,2-2 mannobiose complex
c4z83I_ transferase Chain: I: camp-dependent protein kinase inhibitor alpha; pkab3 in complex with pyrrolidine inhibitor 47a
c4yegA_ transferase Chain: A: polyphosphate kinase 2; characterisation of polyphosphate kinase 2 from the intracellular2 pathogen francisella tularensis
c4xrtB_ lyase Chain: B: stfq aromatase/cyclase; crystal structure of the di-domain aro/cyc stfq from the steffimycin2 biosynthetic pathway
c5dtcA_ protein binding Chain: A: ribosome biogenesis protein ytm1; ubl structure
c5eo6A_ oxidoreductase Chain: A: coproporphyrinogen oxidase; coproporphyrinogen iii oxidase (hemf) from acinetobacter baumannii
c2mzqA_ rna binding protein Chain: A: single-strand telomeric dna-binding protein gbp2; nmr structure of the rrm3 domain of gbp2
c5e06A_ nuclear protein Chain: A: nucleocapsid protein; structure of sin nombre virus nucleoprotein in long-axis crystal form
c4x9zB_ toxin Chain: B: alphad-conotoxin gexxa from the venom of conus generalis; dimeric conotoxin alphad-gexxa
c5cukA_ cell invasion Chain: A: ruler protein; crystal structure of the pscp ss domain
c4wvmA_ toxin Chain: A: stonustoxin subunit alpha; stonustoxin structure
c5evlA_ hydrolase Chain: A: beta-lactamase; crystal structure of beta-lactamase/d-alanine carboxypeptidase from2 chromobacterium violaceum
c5eufA_ hydrolase Chain: A: protease; the crystal structure of a protease from helicobacter pylori
c4z84I_ transferase Chain: I: camp-dependent protein kinase inhibitor alpha; pkab3 in complex with pyrrolidine inhibitor 34a
c4x9zA_ toxin Chain: A: alphad-conotoxin gexxa from the venom of conus generalis; dimeric conotoxin alphad-gexxa
c5epfA_ oxidoreductase Chain: A: peroxiredoxin; crystal structure of peroxidoxin bcpb from mycobacterium tuberculosis
c2n4kA_ antimicrobial protein Chain: A: enterocin-hf; solution structure of enterocin hf, an antilisterial bacteriocin2 produced by enterococcus faecium m3k31
c2mzsA_ rna binding protein Chain: A: protein hrb1; nmr structure of the rrm2 domain of hrb1
c2n2cA_ dna binding protein Chain: A: tar dna-binding protein 43; nmr structure of tdp-43 prion-like hydrophobic helix in dpc
c4rz9A_ rna binding protein Chain: A: pre-mrna-splicing factor 38a; pre-mrna-splicing factor 38a as 1-179
c5evhA_ unknown function Chain: A: uncharacterized protein; crystal structure of known function protein from kribbella flavida dsm2 17836
c5dseA_ protein binding Chain: A: tetratricopeptide repeat protein 7b; crystal structure of the ttc7b/hyccin complex
c5dseB_ protein binding Chain: B: hyccin; crystal structure of the ttc7b/hyccin complex
c5flyB_ metal transport Chain: B: ferrichrome-binding periplasmic protein; the fhud protein from s.pseudintermedius
c2mzrA_ rna binding protein Chain: A: protein hrb1; nmr structure of the rrm1 domain of hrb1
c2mztA_ rna binding protein Chain: A: protein hrb1; nmr structure of the rrm3 domain of hrb1
c5d88A_ hydrolase Chain: A: predicted protease of the collagenase family; the structure of the u32 peptidase mk0906
c5dseC_ protein binding Chain: C: tetratricopeptide repeat protein 7b; crystal structure of the ttc7b/hyccin complex
c4xrwA_ lyase Chain: A: bexl; crystal structure of the di-domain aro/cyc bexl from the be-7585a2 biosynthetic pathway


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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