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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2015 Nov 14

Fold library idPDB HeaderMoleculeTitle
c4zv4C_ translation Chain: C: tse6; structure of tse6 in complex with ef-tu
c4zvdA_ signaling protein Chain: A: diguanylate cyclase dosc; crystal structure of mid domain of the e. coli dosc - form ii
c4x3mB_ transferase Chain: B: rna 2'-o ribose methyltransferase; crystal structure of ttha0275 from thermus thermophilus (hb8) in2 complex with adenosine in space group p212121
c5dm70_ ribosome Chain: 0: 50s ribosomal protein l1; crystal structure of the 50s ribosomal subunit from deinococcus2 radiodurans in complex with hygromycin a
c5fk0F_ structural protein Chain: F: coatomer subunit delta; yeast delta-cop-i mu-homology domain
c5awfA_ transport protein/protein binding Chain: A: fes cluster assembly protein sufb; crystal structure of sufb-sufc-sufd complex from escherichia coli
c4s05B_ transcription/dna Chain: B: dna-binding transcriptional regulator basr; crystal structure of klebsiella pneumoniae pmra in complex with pmra2 box dna
c2n6uA_ unknown function Chain: A: astexin2-dc4; solution study of astexin2-dc4
c5dm5E_ hydrolase Chain: E: putative acyl-coa thioester hydrolase; crystal structure of the hexameric thioesterase y2039 from yersinia2 pestis
c4rs4A_ hydrolase Chain: A: uridylate-specific endoribonuclease; crystal structure and mutational analysis of the endoribonuclease from2 human coronavirus 229e
c5bseF_ oxidoreductase Chain: F: pyrroline-5-carboxylate reductase; crystal structure of medicago truncatula (delta)1-pyrroline-5-2 carboxylate reductase (mtp5cr)
c5c9nB_ cell cycle Chain: B: geminin coiled-coil domain-containing protein 1; crystal structure of gemc1 coiled-coil domain
c2mxpA_ metal binding protein Chain: A: calcium-binding and coiled-coil domain-containing protein solution structure of ndp52 ubiquitin-binding zinc finger
c5avoA_ oxidoreductase Chain: A: homoserine dehydrogenase; crystal structure of the reduced form of homoserine dehydrogenase from2 sulfolobus tokodaii.
c5cegC_ toxin Chain: C: addiction module antidote protein, copg/arc/metj family; x-ray structure of toxin/anti-toxin complex from mesorhizobium2 opportunistum
c4zuyB_ protein binding Chain: B: tsi6; structure of tsi6 from pseudomonas aeruginosa
c4zlhB_ metal binding protein Chain: B: lipopolysaccharide assembly protein b; structure of the lapb cytoplasmic domain at 2 angstroms
c5ah1A_ hydrolase Chain: A: triacylglycerol lipase; structure of esta from clostridium botulinum
c4zvbD_ signaling protein Chain: D: diguanylate cyclase dosc; crystal structure of globin domain of the e. coli dosc - form ii2 (ferrous)
c4wv3A_ ligase/ligase inhibitor Chain: A: anthranilate-coa ligase; crystal structure of the anthranilate coa ligase auaeii in complex2 with anthranoyl-amp
c4z3uB_ viral protein Chain: B: ul31; prv nuclear egress complex
c5eesA_ oxidoreductase Chain: A: 4-hydroxy-tetrahydrodipicolinate reductase; crystal strcuture of dapb in complex with nadp+ from corynebacterium2 glutamicum
c4wl3A_ hydrolase Chain: A: bile salt hydrolase; crystal structure determination of bile salt hydrolase from2 enterococcus feacalis
c5cekA_ transferase Chain: A: tribbles homolog 1; pseudokinase domain of human tribbles homolog 1
c4zvhB_ signaling protein Chain: B: diguanylate cyclase dosc; crystal structure of ggdef domain of the e. coli dosc - form iv
c4rs1B_ cytokine receptor/cytokine Chain: B: granulocyte-macrophage colony-stimulating factor receptor crystal structure of receptor-cytokine complex
c4zxsD_ viral protein Chain: D: virion egress protein ul31; hsv-1 nuclear egress complex
c5csjC_ transferase Chain: C: ribosomal protein s6 kinase alpha-1; s100b-rsk1 crystal structure b
c4ydsA_ hydrolase Chain: A: flagella-related protein h; flah from sulfolobus acidocaldarius with atp and mg-ion
c4qkcA_ viral protein Chain: A: influenza m2 monomer; influenza a m2 wild type tm domain at low ph in the lipidic cubic2 phase under cryo diffraction conditions
c5e8kA_ transferase Chain: A: geranylgeranyl pyrophosphate synthase 10, mitochondrial; crystal structure of polyprenyl pyrophosphate synthase 2 from2 arabidopsis thaliana
c5cegB_ toxin Chain: B: plasmid stabilization system; x-ray structure of toxin/anti-toxin complex from mesorhizobium2 opportunistum
c4z3uC_ viral protein Chain: C: ul34 protein; prv nuclear egress complex
c4zxsC_ viral protein Chain: C: virion egress protein ul34; hsv-1 nuclear egress complex
c5axhA_ hydrolase Chain: A: dextranase; crystal structure of thermophilic dextranase from thermoanaerobacter2 pseudethanolicus, d312g mutant in complex with isomaltohexaose
c5djjA_ hydrolase Chain: A: 3'-phosphoadenosine 5'-phosphate phosphatase; structure of m. tuberculosis cysq, a pap phosphatase with po4 and 2mg2 bound
c5fl3A_ transport protein Chain: A: pili retraction protein pilt; pilt2 from thermus thermophilus
c2n1kA_ structural protein Chain: A: fibronectin; structure of the third type iii domain from human fibronectin
c4qk7A_ viral protein Chain: A: influenza m2 monomer; influenza a m2 wild type tm domain at high ph in the lipidic cubic2 phase under cryo diffraction conditions
c4xklB_ protein binding/metal binding protein Chain: B: calcium-binding and coiled-coil domain-containing protein crystal structure of ndp52 zf2 in complex with mono-ubiquitin
c5d9rA_ biosynthetic protein Chain: A: protein accumulation and replication of chloroplasts 6, crystal structure of a conserved domain in the intermembrane space2 region of the plastid division protein arc6
c4zi2C_ hydrolase Chain: C: cilia- and flagella-associated protein 36; bart-like domain of bartl1/ccdc104 in complex with arl3fl bound to2 gppnhp in p21 21 21
c2mzeA_ hydrolase Chain: A: matrilysin; nmr solution structure of the pro form of human matrilysin (prommp-7)
c4qkmA_ viral protein Chain: A: influenza m2 monomer; influenza a m2 wild type tm domain at low ph in the lipidic cubic2 phase under room temperature diffraction conditions
c5csnC_ transferase Chain: C: ribosomal protein s6 kinase alpha-1; s100b-rsk1 crystal structure c
c2n6vA_ unknown function Chain: A: astexin3; solution study of astexin3
c4qklA_ viral protein Chain: A: influenza m2 monomer, tm domain (22-46); influenza a m2 wild type tm domain at high ph in the lipidic cubic2 phase under room temperature diffraction conditions
c5domA_ plant protein Chain: A: 2s albumin; crystal structure, maturation and flocculating properties of a 2s2 albumin from moringa oleifera seeds


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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