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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2015 Nov 07

Fold library idPDB HeaderMoleculeTitle
c5dxdA_ hydrolase Chain: A: putative beta-glucanase; crystal structure of putative beta-glucanase (rv0315 ortholog) from2 mycobacterium abscessus
c5a15A_ signaling protein Chain: A: btb/poz domain-containing protein kctd16; crystal structure of the btb domain of human kctd16
c4xe3B_ oxidoreductase Chain: B: cytochrome p-450; olep, the cytochrome p450 epoxidase from streptomyces antibioticus2 involved in oleandomycin biosynthesis: functional analysis and3 crystallographic structure in complex with clotrimazole.
c4uesC_ protein binding Chain: C: kctd10; crystal structure of the n-terminal btb domain of human kctd10
c4yzfA_ immune system Chain: A: band 3 anion transport protein; crystal structure of the anion exchanger domain of human erythrocyte2 band 3
c4rvyl_ oxidoreductase Chain: L: photosystem ii reaction center protein l; serial time resolved crystallography of photosystem ii using a2 femtosecond x-ray laser. the s state after two flashes (s3)
c2mwtA_ antimicrobial, antitumor protein Chain: A: cathelicidin-like peptide; nmr structure of crotalicidin in dpc micelles
c4zu3D_ lyase Chain: D: halohydrin epoxidase b; halohydrin hydrogen-halide-lyases, hheb
c4ylcF_ chaperone Chain: F: heat shock protein hsp20; crystal structure of del-c4 mutant of hsp14.1 from sulfolobus2 solfatataricus p2
c5ah0B_ hydrolase Chain: B: lipase; structure of lipase 1 from pelosinus fermentans
c5cqqB_ transcription/dna Chain: B: regulatory protein zeste; crystal structure of the drosophila zeste dna binding domain in2 complex with dna
c5d92B_ membrane protein Chain: B: af2299 protein,phosphatidylinositol synthase; structure of a phosphatidylinositolphosphate (pip) synthase from2 renibacterium salmoninarum
c4rugA_ protein binding Chain: A: slit-robo rho gtpase-activating protein 2; cyrstal structure of slit-robo rho gtpase-activating protein 22 fragment
c2n68A_ unknown function Chain: A: astexin1; solution study of astexin1
c5fkqA_ hydrolase Chain: A: endo-1,4-beta-glucanase/xyloglucanase, putative, gly74a; unraveling the first step of xyloglucan degradation by the soil2 saprophyte cellvibrio japonicus through the functional and3 structural characterization of a potent gh74 endo-xyloglucanase
c5e3pA_ transferase Chain: A: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n- crystal strcuture of dapd from corynebacterium glutamicum
c4xdbC_ oxidoreductase, membrane protein, flavop Chain: C: nadh dehydrogenase-like protein saouhsc_00878; nadh:quinone oxidoreductase (ndh-ii) from staphylococcus aureus -2 holoprotein structure
c4zonB_ oxidoreductase/oxidoreductase inhibitor Chain: B: verruculogen synthase; structure of ftmox1 with fumitremorgen b complex
c5dfkA_ structural protein Chain: A: probable fimbrial chaperone ecpb; crystal structure of the escherichia coli common pilus chaperone, ecpb
c5c6wH_ immune system Chain: H: protein ighv1-69-2,ig lambda chain v-ii region nig-84; anti-cxcl13 scfv - e10
c4x1oA_ transferase Chain: A: 16s rrna (adenine(1408)-n(1))-methyltransferase; crystal structure of the 16s rrna (adenine(1408)-n(1))-2 methyltransferase from catenulisporales acidiphilia
c5aynA_ transport protein Chain: A: solute carrier family 39 (iron-regulated transporter); crystal structure of a bacterial homologue of iron transporter2 ferroportin in outward-facing state
c5ee4A_ metal transport Chain: A: hpua; the crystal structure of hpua from kingella denitrificans in complex2 with human haemoglobin
c4xhiB_ transcription Chain: B: rna-dependent rna polymerase; crystal structure of native thosea asigna virus rna-dependent rna2 polymerase (rdrp) at 2.15 angstrom resolution
c4rvyt_ oxidoreductase Chain: T: photosystem ii reaction center protein t; serial time resolved crystallography of photosystem ii using a2 femtosecond x-ray laser. the s state after two flashes (s3)
c5e3iA_ ligase Chain: A: histidine--trna ligase; crystal structure of a histidyl-trna synthetase from acinetobacter2 baumannii with bound l-histidine and atp
c5dleD_ transferase Chain: D: pts system, fructose-specific iiabc component; crystal structure from a domain (thr161-f265) from fructose-specific2 iiabc component (pts system) from borrelia burgdorferi
c5ccbB_ transferase/rna Chain: B: trna (adenine(58)-n(1))-methyltransferase non-catalytic crystal structure of human m1a58 methyltransferase in a complex with2 trna3lys and sah
c5c5vB_ hydrolase Chain: B: acidocalcisomal pyrophosphatase; recombinant inorganic pyrophosphatase from t brucei brucei
c5aymA_ transport protein Chain: A: solute carrier family 39 (iron-regulated transporter); crystal structure of a bacterial homologue of iron transporter2 ferroportin in outward-facing state with soaked iron
c4rzcC_ immune system Chain: C: fv m6p-1 light chain; fv m6p-1 in complex with mannose-6-phosphate
c4xbsA_ lyase Chain: A: deoxyribose-phosphate aldolase; 2-deoxyribose-5-phosphate aldolase mutant - e78k
c4xmrB_ signaling protein Chain: B: putative methyl-accepting chemotaxis signal transduction crystal structure of the sensory domain of the campylobacter jejuni2 chemoreceptor tlp3 (ccml) with isoleucine bound.
c5cd1B_ transferase/rna Chain: B: trna (adenine(58)-n(1))-methyltransferase non-catalytic structure of an asymmetric tetramer of human trna m1a582 methyltransferase in a complex with sah and trna3lys
c4rvyY_ oxidoreductase Chain: Y: photosystem ii reaction center protein ycf12; serial time resolved crystallography of photosystem ii using a2 femtosecond x-ray laser. the s state after two flashes (s3)
c4yj6A_ hydrolase Chain: A: aryl acylamidase; the crystal structure of a bacterial aryl acylamidase belonging to the2 amidase signature (as) enzymes family
c5ccbA_ transferase/rna Chain: A: trna (adenine(58)-n(1))-methyltransferase catalytic subunit crystal structure of human m1a58 methyltransferase in a complex with2 trna3lys and sah
c4rvyy_ oxidoreductase Chain: Y: photosystem ii reaction center protein ycf12; serial time resolved crystallography of photosystem ii using a2 femtosecond x-ray laser. the s state after two flashes (s3)
c5d6hB_ chaperone/protein transport Chain: B: csua/b; crystal structure of csuc-csua/b chaperone-major subunit pre-assembly2 complex from csu biofilm-mediating pili of acinetobacter baumannii
c5dk6A_ hydrolase Chain: A: 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase; crystal structure of a 5'-methylthioadenosine/s-adenosylhomocysteine2 (mta/sah) nucleosidase (mtan) from colwellia psychrerythraea 34h3 (cps_4743, target psi-029300) in complex with adenine at 2.27 a4 resolution
c5ee2A_ metal transport Chain: A: hemoglobin-haptoglobin-utilization protein; the crystal structure of the c-terminal beta-barrel of hpua from2 neisseria gonorrhoeae
c4rulA_ isomerase/dna Chain: A: dna topoisomerase 1; crystal structure of full-length e.coli topoisomerase i in complex2 with ssdna
c5d2mG_ ligase,protein binding Chain: G: zinc finger protein 451; complex between human sumo2-rangap1, ubc9 and znf451
c4rvyL_ oxidoreductase Chain: L: photosystem ii reaction center protein l; serial time resolved crystallography of photosystem ii using a2 femtosecond x-ray laser. the s state after two flashes (s3)
c4rvyT_ oxidoreductase Chain: T: photosystem ii reaction center protein t; serial time resolved crystallography of photosystem ii using a2 femtosecond x-ray laser. the s state after two flashes (s3)
c5d6hA_ chaperone/protein transport Chain: A: csuc; crystal structure of csuc-csua/b chaperone-major subunit pre-assembly2 complex from csu biofilm-mediating pili of acinetobacter baumannii


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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