Standard Mode | Switch to Expert Mode | Login to view past jobs Retrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2015 Sep 26

Fold library idPDB HeaderMoleculeTitle
c4yw5A_ hydrolase Chain: A: neuraminidase c; crystal structure of streptococcus pneumoniae nanc, complex with2 oseltamivir carboxylate
c4y2wA_ isomerase Chain: A: alanine racemase 1; crystal structure of a thermostable alanine racemase from2 thermoanaerobacter tengcongensis mb4
c4yffB_ transferase/transferase inhibitor Chain: B: serine/threonine-protein kinase tnni3k; tnni3k complexed with inhibitor 2
c5cgnF_ antimicrobial protein Chain: F: l-acpc8-ala-magainin; structure of quasiracemic ala-magainin 2 with a beta amino acid2 substitution at position 8
c4ywkA_ cell cycle Chain: A: cell division control protein 21; pyrococcus furiosus mcm n-terminal domain with zinc-binding subdomain2 b deleted
c3jb9i_ rna binding protein/rna Chain: I: small nuclear ribonucleoprotein f; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
c5dcxK_ dna binding protein Chain: K: protein rep68; structural studies of aav2 rep68 reveal a partially structured linker2 and compact domain conformation
c3jb9a_ rna binding protein/rna Chain: A: pre-mrna-splicing factor spp42; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
c3jb9W_ rna binding protein/rna Chain: W: pre-mrna-splicing factor cdc5; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
c4z8vA_ protein binding Chain: A: avrrxo1-orf1; crystal structure of avrrxo1-orf1:-orf2 complex, native.
c3jb9Y_ rna binding protein/rna Chain: Y: pre-mrna-splicing factor cwf2; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
c4nkqB_ cytokine/cytokine receptor Chain: B: granulocyte-macrophage colony-stimulating factor receptor structure of a cytokine receptor complex
c3jb9R_ rna binding protein/rna Chain: R: pre-mrna-splicing factor cwf4; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
c4ztuA_ dna binding protein/dna Chain: A: dna polymerase subunit gamma-1; structural basis for processivity and antiviral drug toxicity in human2 mitochondrial dna replicase
c4wviA_ hydrolase Chain: A: maltose-binding periplasmic protein,signal peptidase ib; crystal structure of the type-i signal peptidase from staphylococcus2 aureus (spsb) in complex with a substrate peptide (pep2).
c3jb9d_ rna binding protein/rna Chain: D: small nuclear ribonucleoprotein sm d3; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
c5ac4A_ hydrolase Chain: A: n-acetyl-beta-d-glucosaminidase; gh20c, beta-hexosaminidase from streptococcus pneumoniae in2 complex with galnac
c4r4mB_ dna binding protein Chain: B: cgmp-dependent protein kinase 1; crystal structure of c42l cgmp dependent protein kinase i alpha (pkgi2 alpha) leucine zipper
c5cgnG_ antimicrobial protein Chain: G: l-acpc8-ala-magainin; structure of quasiracemic ala-magainin 2 with a beta amino acid2 substitution at position 8
c4reyB_ membrane protein Chain: B: golgin subfamily a member 2; crystal structure of the grasp65-gm130 c-terminal peptide complex
c5cf3A_ protein binding Chain: A: bone sialoprotein-binding protein; crystal structures of bbp from staphylococcus aureus
c2mw7A_ toxin Chain: A: mo3964; solution nmr structure of a novel cysteine framework containing conus2 peptide mo3964
c5bzuA_ rna binding protein/rna Chain: A: suppressor protein mpt5; crystal structure of the rna-binding domain of yeast puf5p bound to2 aat2 rna
c4z8vB_ protein binding Chain: B: avrrxo1-orf2; crystal structure of avrrxo1-orf1:-orf2 complex, native.
c4wwmB_ signaling protein Chain: B: uncharacterized protein; x-ray crystal structure of sulfolobus solfataricus urm1
c5d9bA_ hydrolase Chain: A: luciferin regenerating enzyme; luciferin-regenerating enzyme solved by siras using xfel (refined2 against native data)
c3jb9b_ rna binding protein/rna Chain: B: pre-mrna-splicing factor cwf10; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
c2mv2A_ actin binding protein Chain: A: cofilin/actin-depolymerizing factor homolog; solution structure of twinstar from drosophila melanogastor
c4y0kA_ oxidoreductase Chain: A: ante; structure of crotonyl-coa carboxylase/reductase ante in complex with2 nadp
c5cgnH_ antimicrobial protein Chain: H: l-acpc8-ala-magainin; structure of quasiracemic ala-magainin 2 with a beta amino acid2 substitution at position 8
c2mufA_ immune system Chain: A: trsp; binding activity, structure, and immunogenicity of synthetic peptides2 derived from plasmodium falciparum celtos and trsp proteins
c5d6sB_ oxidoreductase Chain: B: epoxyqueuosine reductase; structure of epoxyqueuosine reductase from streptococcus thermophilus.
c5cuzA_ chaperone Chain: A: methylmalonic aciduria and homocystinuria type d protein, crystal structure of semet-substituted n-terminal truncated human b12-2 chaperone cbld (108-296)
c4zmiA_ dna binding protein Chain: A: telomere length regulator taz1; crystal structure of the helical domain of s. pombe taz1
c5cgnE_ antimicrobial protein Chain: E: l-acpc8-ala-magainin; structure of quasiracemic ala-magainin 2 with a beta amino acid2 substitution at position 8
c5dn7A_ structural protein Chain: A: protein fam179b; crescerin uses a tog domain array to regulate microtubules in the2 primary cilium
c3jb9c_ rna binding protein/rna Chain: C: u5 snrna; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
c5a72B_ hydrolase/dna Chain: B: dna endonuclease i-cvui; crystal structure of the homing endonuclease i-cvui in complex2 with its target (sro1.3) in the presence of 2 mm ca
c4wxmD_ transcription regulator Chain: D: transcriptional regulator fleq; fleq rec domain from pseudomonas aeruginosa pao1
c3jb9J_ rna binding protein/rna Chain: J: small nuclear ribonucleoprotein g; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
c3jb9k_ rna binding protein/rna Chain: K: pre-mrna-splicing factor prp5; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
c3jb9B_ rna binding protein/rna Chain: B: pre-mrna-splicing factor cwf10; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
c5cgoA_ antimicrobial protein Chain: A: acpc-13 derivative of ala-magainin 2; structure of quasiracemic ala-magainin 2 with a beta amino acid2 substitution at position 13
c4reyA_ membrane protein Chain: A: golgi reassembly-stacking protein 1; crystal structure of the grasp65-gm130 c-terminal peptide complex
c3jb9m_ rna binding protein/rna Chain: M: pre-mrna-processing protein 45; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
c3jb9T_ rna binding protein/rna Chain: T: pre-mrna-processing factor 19; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
c2n6yA_ ligase Chain: A: hmwp2 nonribosomal peptide synthetase; solution structure of holo arcp from yersiniabactin synthetase
c3jacA_ metal transport Chain: A: piezo-type mechanosensitive ion channel component 1; cryo-em study of a channel
c4d4wA_ transcription Chain: A: methyl-cpg-binding domain protein 1; solution structure of human mbd1 cxxc1 domain
c4ru8C_ hydrolase Chain: C: uncharacterized protein; structure of pnob8 para with amppnp
c3jb9K_ rna binding protein/rna Chain: K: pre-mrna-splicing factor prp5; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
c3jb9A_ rna binding protein/rna Chain: A: pre-mrna-splicing factor spp42; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
c3jb9g_ rna binding protein/rna Chain: G: small nuclear ribonucleoprotein sm d2; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
c4xzjA_ transferase Chain: A: putative nad(+)--arginine adp-ribosyltransferase vis; crystal structure of adp-ribosyltransferase vis in complex with nad
c3jacB_ metal transport Chain: B: piezo-type mechanosensitive ion channel component 1; cryo-em study of a channel
c5aca3_ virus Chain: 3: vp3; structure-based energetics of protein interfaces guide2 foot-and-mouth disease virus vaccine design
c3jb9D_ rna binding protein/rna Chain: D: small nuclear ribonucleoprotein sm d3; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
c5czyA_ transferase Chain: A: legionella effector legas4; crystal structure of legas4
c3jacC_ metal transport Chain: C: piezo-type mechanosensitive ion channel component 1; cryo-em study of a channel
c3jb9h_ rna binding protein/rna Chain: H: small nuclear ribonucleoprotein e; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
c4zu9A_ translation Chain: A: elongation factor selb; crystal structure of bacterial selenocysteine-specific elongation2 factor ef-sec
c5cw9A_ de novo protein Chain: A: de novo designed ferredoxin-ferredoxin domain insertion crystal structure of de novo designed ferredoxin-ferredoxin domain2 insertion protein
c5aca1_ virus Chain: 1: vp1; structure-based energetics of protein interfaces guide2 foot-and-mouth disease virus vaccine design
c3jb9e_ rna binding protein/rna Chain: E: small nuclear ribonucleoprotein-associated protein b; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
c3jb9L_ rna binding protein/rna Chain: L: pre-mrna-splicing factor cwf17; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
c4zmkA_ dna binding protein Chain: A: telomere length regulator taz1; crystal structure of the dimerization domain of s. pombe taz1
c2mxbA_ membrane protein Chain: A: erythropoietin receptor; structure of the transmembrane domain of the mouse erythropoietin2 receptor
c3jb9U_ rna binding protein/rna Chain: U: pre-mrna-processing factor 19; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
c3jb9E_ rna binding protein/rna Chain: E: small nuclear ribonucleoprotein-associated protein b; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
c5c6tA_ viral protein/immue system Chain: A: envelope glycoprotein b; crystal structure of hcmv glycoprotein b in complex with 1g2 fab
c3jb9j_ rna binding protein/rna Chain: J: small nuclear ribonucleoprotein g; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
c5cgoB_ antimicrobial protein Chain: B: acpc-13 derivative of ala-magainin 2; structure of quasiracemic ala-magainin 2 with a beta amino acid2 substitution at position 13
c3jb9X_ rna binding protein/rna Chain: X: pre-mrna-splicing factor cwf11; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution
c2mudA_ membrane protein Chain: A: variant-specific surface protein; structural modifications to a high-activity binding peptide located2 whitin the pfemp1 nts domain induce protection against p. falciparum3 malaria in aotus monkeys
c3jb9M_ rna binding protein/rna Chain: M: pre-mrna-processing protein 45; cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution


Phyre is for non-commercial use only

Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions

Phyre2 is part of Genome3D