Standard Mode | Switch to Expert Mode | Login to view past jobs Retrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2015 Sep 19

Fold library idPDB HeaderMoleculeTitle
c4rs8A_ dna binding protein Chain: A: aspa; apo structure of novel pnob8 plasmid centromere binding protein
c5dm3A_ ligase Chain: A: l-glutamine synthetase; crystal structure of glutamine synthetase from chromohalobacter2 salexigens dsm 3043(csal_0679, target efi-550015) with bound adp
c5cwuC_ transport protein Chain: C: nucleoporin nup188; crystal structure of chaetomium thermophilum nup188 tail domain
c5dg3D_ transferase Chain: D: acyl-[acyl-carrier-protein]--udp-n-acetylglucosamine o- structure of pseudomonas aeruginosa lpxa in complex with udp-3-o-(r-3-2 hydroxydecanoyl)-glcnac
c5cw5D_ metal binding protein Chain: D: protein fam175b; structure of cfbrcc36-cfkiaa0157 complex (qsq mutant)
c5bzaA_ hydrolase Chain: A: beta-n-acetylhexosaminidase; crystal structure of cbsa from thermotoga neapolitana
c5bo5B_ hydrolase Chain: B: neq263; structure of a unique atp synthase subunit neqb from nanoarcheaum2 equitans
c4xqkB_ hydrolase/dna Chain: B: llabiii; atp-dependent type isp restriction-modification enzyme llabiii bound2 to dna
c4xtbA_ transport protein Chain: A: calcium uniporter protein, mitochondrial; crystal structure of the n-terminal domain of the human mitochondrial2 calcium uniporter
c4rs7R_ dna binding protein Chain: R: parb-c; structure of pnob8 parb-c
c4ywoA_ oxidoreductase Chain: A: mercuric reductase; mercuric reductase from metallosphaera sedula
c2n5iA_ transport protein Chain: A: peptidyl carrier protein pltl; pltl-pyrrolyl
c4yh5B_ transferase Chain: B: levoglucosan kinase; lipomyces starkeyi levoglucosan kinase bound to adp and manganese
c5aebA_ hydrolase Chain: A: lra-12; crystal structure of the class b3 di-zinc metallo-beta-2 lactamase lra-12 from an alaskan soil metagenome.
c4uetA_ retinol-binding protein Chain: A: nematode fatty acid retinoid binding protein; diversity in the structures and ligand binding sites among2 the fatty acid and retinol binding proteins of nematodes3 revealed by na-far-1 from necator americanus
c4xsjA_ transport protein Chain: A: lysozyme,calcium uniporter protein, mitochondrial; crystal structure of the n-terminal domain of the human mitochondrial2 calcium uniporter fused with t4 lysozyme
c5dlcC_ transferase Chain: C: pyridoxine 5'-phosphate synthase; x-ray crystal structure of a pyridoxine 5-prime-phosphate synthase2 from pseudomonas aeruginosa
c3wyzA_ hydrolase Chain: A: ribonuclease p protein component 3; on archaeal homologs of the human rnase p protein rpp30 in the2 hyperthermophilic archaeon thermococcus kodakarensis
c4z7cA_ lyase Chain: A: diphosphomevalonate decarboxylase; diphosphomevalonate decarboxylase from the sulfolobus solfataricus,2 space group h32
c5cvvB_ transferase Chain: B: (iso)eugenol o-methyltransferase; coniferyl alcohol bound monolignol 4-o-methyltransferase 9
c5cmzD_ viral protein/inhibitor Chain: D: artificial hiv entry inhibitor ap3; artificial hiv fusion inhibitor ap3 fused to the c-terminus of gp412 nhr
c4x3nA_ protein binding Chain: A: calcium-regulated actin-bundling protein; crystal structure of 34 kda f-actin bundling protein from2 dictyostelium discoideum
c2mu9A_ peptide binding protein Chain: A: p101/acidic basic repeat antigen; changing abra protein peptide to fit the hla-dr b1*0301 molecule2 renders it protection-inducing
c5cwwA_ transport protein Chain: A: nucleoporin nup145n; crystal structure of the chaetomium thermophilum heterotrimeric nup822 ntd-nup159 tail-nup145n apd complex
c5a1kB_ actin-binding protein Chain: B: adseverin; crystal structure of calcium-free human adseverin domains a1-a3
c5cwtB_ transport protein Chain: B: nucleoporin nup57; to be published
c4zrmB_ isomerase Chain: B: udp-glucose 4-epimerase; crystal structure of udp-glucose 4-epimerase (tm0509) from2 hyperthermophilic eubacterium thermotoga maritima
c5bn4A_ hydrolase Chain: A: v-type atp synthase alpha chain; structure of a unique atp synthase neqa-neqb in complex with anp from2 nanoarcheaum equitans
c5cwvB_ transport protein Chain: B: nucleoporin nup192; crystal structure of chaetomium thermophilum nup192 tail domain
c2n2tA_ unknown function, structural genomics Chain: A: or303; solution nmr structure of de novo designed protein (fda_60), northeast2 structural genomics consortium (nesg) target or303
c5dgxA_ transport protein Chain: A: lipid a export atp-binding/permease protein msba; 1.73 angstrom resolution crystal structure of the abc-atpase domain2 (residues 357-609) of lipid a transport protein (msba) from3 francisella tularensis subsp. tularensis schu s4 in complex with adp
c2mulA_ protein binding Chain: A: e3 ubiquitin-protein ligase huwe1; solution structure of the ubm1 domain of human huwe1/arf-bp1
c4wepA_ transport protein Chain: A: putative osmoprotectant uptake system substrate-binding apo yehz from escerichia coli
c5cw4C_ metal binding protein Chain: C: brca1/brca2-containing complex subunit 3; structure of cfbrcc36-cfkiaa0157 complex (selenium edge)
c5by4A_ protein transport Chain: A: protein tolr; structure and function of the escherichia coli tol-pal stator protein2 tolr
c4rajA_ oxidoreductase Chain: A: heme oxygenase; crystal structure of heme oxygenase 2 from chlamydomonas reinhardtii2 without heme.
c5a4hA_ transferase Chain: A: 1-acylglycerol-3-phosphate o-acyltransferase abhd5; solution structure of the lipid droplet anchoring peptide2 of cgi-58 bound to dpc micelles
c2muaA_ immune system Chain: A: ring-infected erythrocyte surface antigen; shifting the polarity of some critical residues in malarial peptides2 binding to host cells is a key factor in breaking conserved antigens
c5cwwC_ transport protein Chain: C: nucleoporin nup159; crystal structure of the chaetomium thermophilum heterotrimeric nup822 ntd-nup159 tail-nup145n apd complex
c5ca8A_ hydrolase Chain: A: protein sey1; structures of the yeast dynamin-like gtpase sey1p in complex with gdp
c4wndB_ signaling protein/protein binding Chain: B: ferm and pdz domain-containing protein 4; crystal structure of the tpr domain of lgn in complex with2 frmpd4/preso1 at 1.5 angstrom resolution
c5cw6A_ metal binding protein Chain: A: drbrcc36; structure of metal dependent enzyme drbrcc36
c4rgyA_ hydrolase Chain: A: esterase; structural and functional analysis of a low-temperature-active2 alkaline esterase from south china sea marine sediment microbial3 metagenomic library
c5dllA_ hydrolase Chain: A: aminopeptidase n; aminopeptidase n (pepn) from francisella tularensis subsp. tularensis2 schu s4
c5dggB_ unknown function Chain: B: uncharacterized protein; central domain of uncharacterized lpg1148 protein from legionella2 pneumophila
c5cwtC_ transport protein Chain: C: nucleoporin nup57; to be published
c2n2uA_ unknown function, structural genomics Chain: A: or358; solution nmr structure of de novo designed ferredoxin fold protein2 sfr3, northeast structural genomics consortium (nesg) target or358
c3wz0C_ hydrolase Chain: C: ribonuclease p protein component 2; on archaeal homologs of the human rnase p proteins pop5 and rpp30 in2 the hyperthermophilic archaeon thermococcus kodakarensis
c4rclB_ chaperone Chain: B: espg3; structure of espg3 chaperone from the type vii (esx-3) secretion2 system, space group p43212
c2n31A_ immune system Chain: A: toll interacting protein variant; tom1 negatively modulates binding of tollip to phosphatidylinositol 3-2 phosphate via a coupled folding and binding mechanism
c4rsfA_ dna binding protein Chain: A: parb domain protein nuclease; structure of pnob8-like parb n-domain
c4wneB_ signaling protein/protein binding Chain: B: peptide from ferm and pdz domain-containing protein 4; crystal structure of the tpr domain of lgn in complex with2 frmpd4/preso1 at 2.0 angstrom resolution
c5c5gA_ hydrolase Chain: A: spherulin-4; crystal structure of aspergillus clavatus sph3
c5cwwB_ transport protein Chain: B: nucleoporin nup82; crystal structure of the chaetomium thermophilum heterotrimeric nup822 ntd-nup159 tail-nup145n apd complex
c2n3zA_ structural genomics, de novo protein Chain: A: or446; solution nmr structure of de novo designed protein, rossmann2x2 fold,2 northeast structural genomics consortium (nesg) target or446


Phyre is for non-commercial use only

Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions

Phyre2 is part of Genome3D