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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2015 Jul 11

Fold library idPDB HeaderMoleculeTitle
c5a1uC_ transport protein Chain: C: coatomer subunit alpha; the structure of the copi coat triad
c4wgkB_ hydrolase Chain: B: neutral ceramidase; crystal structure of human neutral ceramidase with zn-bound phosphate
c5a1vL_ transport protein Chain: L: coatomer subunit beta; the structure of the copi coat linkage i
c4s3rA_ transferase Chain: A: 4-alpha-glucanotransferase; amylomaltase malq from escherichia coli in complex with the pseudo-2 heptasaccharide acarviosine-glucose-acarbose
c4znlB_ viral protein Chain: B: phage terminase large subunit; thermus phage p74-26 large terminase atpase domain bound to adp2 beryllium fluoride
c4d6yA_ signaling protein Chain: A: bacterial regulatory, fis family protein; crystal structure of the receiver domain of ntrx from2 brucella abortus in complex with beryllofluoride and3 magnesium
c4urfB_ oxidoreductase Chain: B: cyclohexanol dehydrogenase; molecular genetic and crystal structural analysis of 1-(4-2 hydroxyphenyl)-ethanol dehydrogenase from aromatoleum3 aromaticum ebn1
c5a1yM_ transport protein Chain: M: coatomer subunit gamma-1; the structure of the copi coat linkage iv
c4zrlA_ transferase Chain: A: poly(a) rna polymerase gld-2; structure of the non canonical poly(a) polymerase complex gld-2 - gld-2 3
c4ylfD_ oxidoreductase Chain: D: dihydropyrimidine dehydrogenase subunit a; insights into flavin-based electron bifurcation via the nadh-dependent2 reduced ferredoxin-nadp oxidoreductase structure
c4u9rA_ hydrolase Chain: A: czcp cation efflux p1-atpase; structure of the n-terminal extension from cupriavidus metallidurans2 czcp
c5bthA_ hydrolase Chain: A: decapping nuclease rai1; crystal structure of candida albicans rai1
c5a1vV_ transport protein Chain: V: coatomer subunit gamma-1; the structure of the copi coat linkage i
c4wjtB_ lyase Chain: B: uncharacterized protein yuic; stationary phase survival protein yuic from b.subtilis complexed with2 nag
c4ylfA_ oxidoreductase Chain: A: dihydroorotate dehydrogenase b (nad(+)), electron transfer insights into flavin-based electron bifurcation via the nadh-dependent2 reduced ferredoxin-nadp oxidoreductase structure
c5btoA_ hydrolase Chain: A: ssrai1; crystal structure of scheffersomyces stipitis rai1
c5brkB_ transferase/signaling protein Chain: B: serine/threonine-protein kinase lats1; pmob1-lats1 complex
c5a1vP_ transport protein Chain: P: coatomer subunit delta; the structure of the copi coat linkage i
c5bxgA_ unknown function Chain: A: uncharacterized beta-sandwich protein; crystal structure of an uncharacterized beta-sandwich protein2 (cd630_09570) from clostridium difficile 630 at 1.90 a resolution
c4wu0B_ hydrolase Chain: B: similar to yter (bacilus subtilis); structural analysis of c. acetobutylicum atcc 824 glycoside hydrolase2 from family 105
c5c8hA_ replication Chain: A: origin recognition complex subunit 2; crystal structure of orc2 c-terminal domain
c5bs7F_ transcription regulator Chain: F: protein spt2 homolog; structure of histone h3/h4 in complex with spt2
c5btrB_ hydrolase/substrate Chain: B: nad-dependent protein deacetylase sirtuin-1,nad-dependent crystal structure of sirt1 in complex with resveratrol and an amc-2 containing peptide
c4zq8B_ transferase Chain: B: isoprenoid synthase; crystal structure of a terpene synthase from streptomyces lydicus,2 target efi-540129
c5bsaE_ transcription regulator Chain: E: protein spt2 homolog; structure of histone h3/h4 in complex with spt2
c5c65A_ transport protein Chain: A: solute carrier family 2, facilitated glucose transporter structure of the human glucose transporter glut3 / slc2a3
c5c4yB_ transcription Chain: B: putative transcription regulator lmo0852; crystal structure of putative tetr family transcription factor from2 listeria monocytogenes
c5a1yH_ transport protein Chain: H: coatomer subunit delta; the structure of the copi coat linkage iv
c2mu3A_ structural protein Chain: A: aciniform spidroin 1; spider wrapping silk fibre architecture arising from its modular2 soluble protein precursor
c5c4qB_ transcription Chain: B: bromodomain; crystal structure analysis of bromodomain from leishmania donovani2 complexed with bromosporine
c4ufcA_ hydrolase Chain: A: gh95; crystal structure of the gh95 enzyme bacova_03438
c4zrlB_ transferase Chain: B: defective in germ line development protein 3; structure of the non canonical poly(a) polymerase complex gld-2 - gld-2 3
c5a1vG_ transport protein Chain: G: coatomer subunit beta'; the structure of the copi coat linkage i
c3wwyA_ oxidoreductase Chain: A: d-lactate dehydrogenase; the crystal structure of d-lactate dehydrogenase from fusobacterium2 nucleatum subsp. nucleatum
c5btbA_ hydrolase Chain: A: afr263cp; crystal structure of ashbya gossypii rai1
c5a1vK_ transport protein Chain: K: coatomer subunit alpha; the structure of the copi coat linkage i
c4qszB_ transcription Chain: B: maltose-binding periplasmic protein, jmjc domain-containing crystal structure of mouse jmjd7 fused with maltose-binding protein
c4zkcA_ viral protein/cytokine Chain: A: chemokine binding protein; orf chemokine binding protein complexed with ccl7
c2mvzA_ isomerase Chain: A: peptidyl-prolyl cis-trans isomerase; solution structure for cyclophilin a from geobacillus kaustophilus
c5bsaF_ transcription regulator Chain: F: protein spt2 homolog; structure of histone h3/h4 in complex with spt2
c3wwxA_ hydrolase Chain: A: s12 family peptidase; crystal structure of d-stereospecific amidohydrolase from streptomyces2 sp. 82f2
c5c86A_ oxidoreductase Chain: A: kelch domain-containing protein; novel fungal alcohol oxidase with catalytic diversity among the aa52 family, apo form
c5bypA_ unknown function Chain: A: putative uncharacterized protein; crystal structure of an uncharacterized protein (bacegg_01585) from2 bacteroides eggerthii dsm 20697 at 2.60 a resolution
c4yhjA_ transferase Chain: A: g protein-coupled receptor kinase 4; structure and function of the hypertension variant a486v of g protein-2 coupled receptor kinase 4 (grk4)
c3wwzB_ oxidoreductase Chain: B: d-lactate dehydrogenase (fermentative); the crystal structure of d-lactate dehydrogenase from pseudomonas2 aeruginosa
c5brmG_ transferase/signaling protein Chain: G: serine/threonine-protein kinase 3; structural basis for mob1-dependent activation of the core mst-lats2 kinase cascade in hippo signaling
c4o9iX_ hydrolase Chain: X: chromodomain-helicase-dna-binding protein 4; structure of chd4 double chromodomains depicts cooperative folding for2 dna binding
c2mz7A_ protein binding Chain: A: microtubule-associated protein tau; structure of tau(267-312) bound to microtubules


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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