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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2015 Jun 06

Fold library idPDB HeaderMoleculeTitle
c5a21H_ viral protein Chain: H: major tail protein 17.1; structure of bacteriophage spp1 head-to-tail interface2 without dna and tape measure protein
c4xuoB_ sugar binding protein Chain: B: endo-1,4-beta-xylanase c; structure of the cbm22-1 xylan-binding domain from paenibacillus2 barcinonensis xyn10c
c5bnzA_ ligase Chain: A: glutamine--trna ligase; crystal structure of glutamine-trna ligase /glutaminyl-trna synthetase2 (glnrs) from pseudomonas aeruginosa
c4xuqC_ sugar binding protein Chain: C: endo-1,4-beta-xylanase c; structure of the cbm22-2 xylan-binding domain from paenibacillus2 barcinonensis xyn10c in complex with xylotriose
c4pw3B_ oxidoreductase Chain: B: putative sulfite oxidase; crystal structure of the sulfite dehydrogenase sort from sinorhizobium2 meliloti
c2mzpI_ contractile protein Chain: I: troponin i, cardiac muscle; structure and dynamics of the acidosis-resistant a162h mutant of the2 switch region of troponin i bound to the regulatory domain of3 troponin c
c4yxbA_ protein transport Chain: A: flagellar motor switch protein flim,flagellar motor switch flim(spoa)::flin fusion protein
c4tqjA_ sugar binding protein Chain: A: lectin 2; structural basis of specific recognition of non-reducing terminal n-2 acetylglucosamine by an agrocybe aegerita lection
c4pkmA_ toxin Chain: A: cry51aa1; crystal structure of bacillus thuringiensis cry51aa1 protoxin at 1.652 angstroms resolution
c3j9xJ_ virus Chain: J: coat protein; a virus that infects a hyperthermophile encapsidates a-form dna
c4ue0A_ viral protein Chain: A: fiber; structure of the bovine atadenovirus type 4 fibre head2 protein
c4w8lB_ hydrolase Chain: B: endo-1,4-beta-xylanase c; structure of gh10 from paenibacillus barcinonensis
c5a2kH_ immune system Chain: H: ig lambda-1 chain v region s43; crystal structure of scfv-sm3 in complex with apd-tgalnac-rp
c4z29B_ signaling protein Chain: B: magnetotaxis protein mtxa; crystal structure of the magnetobacterial protein mtxa c-terminal2 domain
c4xupD_ sugar binding protein Chain: D: endo-1,4-beta-xylanase c; structure of the n-terminal cbm22-1-cbm22-2 tandem domain from2 paenibacillus barcinonensis xyn10c
c4yxaB_ protein transport Chain: B: surface presentation of antigens protein spao; complex of spao(spoa1,2 semet) and orgb(apar)::t4lysozyme fusion2 protein
c4x3iA_ signaling protein Chain: A: activity-regulated cytoskeleton-associated protein; the crystal structure of arc n-lobe complexed with camk2a fragment
c5ajtA_ hydrolase Chain: A: phosphoribohydrolase lonely guy; crystal structure of ligand-free phosphoribohydrolase2 lonely guy from claviceps purpurea
c5ahsB_ oxidoreductase Chain: B: acyl-coa dehydrogenase; 3-sulfinopropionyl-coenzyme a (3sp-coa) desulfinase from2 advenella mimgardefordensis dpn7t: holo crystal structure3 with the substrate analog succinyl-coa
c5a0gC_ cell adhesion Chain: C: surface anchored protein; n-terminal thioester domain of surface protein from2 clostridium perfringens
c4whnB_ transferase Chain: B: apxc; structure of toxin-activating acyltransferase (taat)
c4pwaA_ electron transport Chain: A: putative cytochrome c; crystal structure of the c-type cytochrome soru from sinorhizobium2 meliloti
c4x3xA_ signaling protein Chain: A: activity-regulated cytoskeleton-associated protein; the crystal structure of arc c-lobe
c4wo1A_ signaling protein Chain: A: tyro protein tyrosine kinase-binding protein; crystal structure of the dap12 transmembrane domain in lipid cubic2 phase
c4yk8B_ protein transport Chain: B: autophagy protein 13; crystal structure of the atg101-atg13 complex from fission yeast
c5a20B_ viral protein Chain: B: portal protein; structure of bacteriophage spp1 head-to-tail interface2 filled with dna and tape measure protein
c4z34A_ transport protein/inhibitor Chain: A: lysophosphatidic acid receptor 1, soluble cytochrome b562; crystal structure of human lysophosphatidic acid receptor 1 in complex2 with ono9780307
c4wo1B_ signaling protein Chain: B: tyro protein tyrosine kinase-binding protein; crystal structure of the dap12 transmembrane domain in lipid cubic2 phase
c4y9lB_ oxidoreductase Chain: B: protein acdh-11, isoform b; crystal structure of caenorhabditis elegans acdh-11
c4d51A_ structural protein Chain: A: cyma; crystal structure of cyma from klebsiella oxytoca
c5a0nA_ cell adhesion Chain: A: protein f2 like fibronectin-binding protein; n-terminal thioester domain of protein f2 like fibronectin-2 binding protein from streptococcus pneumoniae
c4u06A_ unknown function Chain: A: lic10831; structure of leptospira interrogans lrr protein lic10831
c4u08A_ unknown function Chain: A: lic11098; structure of leptospira interrogans lrr protein lic11098
c4wolB_ signaling protein Chain: B: tyro protein tyrosine kinase-binding protein; crystal structure of the dap12 transmembrane domain in lipidic cubic2 phase
c4zv3B_ hydrolase Chain: B: cytosolic acyl coenzyme a thioester hydrolase; crystal structure of the n- and c-terminal domains of mouse acyl-coa2 thioesterase 7
c4yxaA_ protein transport Chain: A: surface presentation of antigens protein spao; complex of spao(spoa1,2 semet) and orgb(apar)::t4lysozyme fusion2 protein
c4ykeA_ hydrolase Chain: A: mre11; crystal structure of eukaryotic mre11 catalytic domain from chaetomium2 thermophilum
c4yk8A_ protein transport Chain: A: meiotically up-regulated gene 66 protein; crystal structure of the atg101-atg13 complex from fission yeast
c4wolA_ signaling protein Chain: A: tyro protein tyrosine kinase-binding protein; crystal structure of the dap12 transmembrane domain in lipidic cubic2 phase
c5bmqA_ hydrolase Chain: A: erfk/ybis/ycfs/ynhg family protein; crystal structure of l,d-transpeptidase (yku) from stackebrandtia2 nassauensis
c5al6A_ structural protein Chain: A: anastral spindle 2; central coiled-coil domain (cccd) of drosophila2 melanogaster ana2. a natural, parallel, tetrameric coiled-3 coil bundle.
c2mxmA_ toxin Chain: A: entity; nmr solution structure of trtx-tp1a from the tarantula thrixopelma2 pruriens
c4ydjA_ immune system Chain: A: heavy chain of antibody 44-vrc13.01; crystal structure of broadly and potently neutralizing antibody 44-2 vrc13.01 in complex with hiv-1 clade ae strain 93th057 gp120
c5a0lA_ cell adhesion Chain: A: fibronectin-binding protein; n-terminal thioester domain of fibronectin-binding protein2 sfbi from streptococcus pyogenes
c4x8kA_ transcription activator Chain: A: rna polymerase sigma factor siga; mycobacterium tuberculosis rbpa-sid in complex with sigmaa domain 2
c4u09A_ unknown function Chain: A: lic12759; structure of leptospira interrogans lrr protein lic12759
c4wolC_ signaling protein Chain: C: tyro protein tyrosine kinase-binding protein; crystal structure of the dap12 transmembrane domain in lipidic cubic2 phase
c4y61B_ hydrolase/signaling protein Chain: B: slit and ntrk-like protein 2; crystal structure of the complex between slitrk2 lrr1 and ptp delta2 ig1-fn1
c4x8kB_ transcription activator Chain: B: rna polymerase-binding protein rbpa; mycobacterium tuberculosis rbpa-sid in complex with sigmaa domain 2
c4zr8B_ lyase Chain: B: uroporphyrinogen decarboxylase; structure of uroporphyrinogen decarboxylase from acinetobacter2 baumannii
c4wzxA_ cell cycle Chain: A: serine/threonine-protein kinase ulk3; ulk3 regulates cytokinetic abscission by phosphorylating escrt-iii2 proteins
c5amqA_ hydrolase Chain: A: rna polymerase l; structure of the la crosse bunyavirus polymerase in complex2 with the 3' and 5' viral rna
c5al7A_ structural protein Chain: A: spindle assembly abnormal protein 6 homolog; n-terminal fragment of drosophila melanogaster sas-6 (f143d)2 , dimerised via the coiled-coil domain.
c4wo1C_ signaling protein Chain: C: tyro protein tyrosine kinase-binding protein; crystal structure of the dap12 transmembrane domain in lipid cubic2 phase
c4qs4A_ cell adhesion Chain: A: cofb; crystal structure of cofb from enterotoxigenic escherichia coli
c5amrA_ hydrolase Chain: A: rna polymerase l; structure of the la crosse bunyavirus polymerase in complex2 with the 3' viral rna
c4tzhB_ unknown function Chain: B: lic12234; structure of leptospira interrogans lrr protein lic12234
c4wo1D_ signaling protein Chain: D: tyro protein tyrosine kinase-binding protein; crystal structure of the dap12 transmembrane domain in lipid cubic2 phase


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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