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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2015 May 16

Fold library idPDB HeaderMoleculeTitle
c3j9tZ_ hydrolase Chain: Z: v-type proton atpase subunit c; yeast v-atpase state 1
c4qdbF_ hydrolase Chain: F: thioesterase pa1618; crystal structure of mutant thioesterase pa1618 (q49a) from2 pseudomonas aeruginosa
c3j9vM_ hydrolase Chain: M: v-type proton atpase subunit d; yeast v-atpase state 3
c4xi5B_ viral protein/immune system Chain: B: envelope glycoprotein l; ghgl of varicella-zoster virus in complex with human neutralizing2 antibodies
c3j9uD_ hydrolase Chain: D: v-type proton atpase subunit b; yeast v-atpase state 2
c4zchA_ cytokine Chain: A: tumor necrosis factor ligand superfamily member 13,tumor single-chain human april-baff-baff heterotrimer
c4zjmA_ unknown function Chain: A: lipoprotein lpqh; crystal structure of mycobacterium tuberculosis lpqh (rv3763)
c3j9vC_ hydrolase Chain: C: v-type proton atpase catalytic subunit a; yeast v-atpase state 3
c4umkA_ dna binding protein/dna Chain: A: probable chromosome-partitioning protein parb; the complex of spo0j and pars dna in chromosomal partition system
c4zn6B_ oxidoreductase Chain: B: 1-deoxy-d-xylulose 5-phosphate reductoisomerase; x-ray crystal structure of 1-deoxy-d-xylulose 5-phosphate2 reductoisomerase (ispc) from acinetobacter baumannii
c4zo4A_ transferase Chain: A: dephospho-coa kinase; dephospho-coa kinase from campylobacter jejuni.
c3j9tQ_ hydrolase Chain: Q: v-type proton atpase subunit d; yeast v-atpase state 1
c2mp8A_ antimicrobial protein Chain: A: nkr-5-3b; nmr structure of nkr-5-3b
c4u02C_ transport protein Chain: C: amino acid abc transporter, atp-binding protein; crystal structure of apo-ttha1159
c4y0bA_ protein binding Chain: A: double clp-n motif protein; the structure of arabidopsis clpt1
c2n03A_ structural protein Chain: A: plectin; solution nmr structure plectin repeat domain 6 (4403-4606) of plectin2 from homo sapiens, northeast structural genomics consortium (nesg)3 target hr6354e
c4ynvA_ chaperone Chain: A: acl4; assembly chaperone of rpl4 (acl4) (residues 28-338)
c4ydhC_ signaling protein Chain: C: formin-like protein 1; the structure of human fmnl1 n-terminal domains bound to cdc42
c4cw9A_ oxidoreductase Chain: A: thioredoxin; entamoeba histolytica thiredoxin c34s mutant
c3x1lE_ rna binding protein/rna/dna Chain: E: cmr4; crystal structure of a cas protein
c4yzyA_ signaling protein Chain: A: eukaryotic translation initiation factor 2-alpha kinase 3; crystal structures reveal transient perk luminal domain2 tetramerization in er stress signaling
c4y0cB_ protein binding Chain: B: clp protease-related protein at4g12060, chloroplastic; the structure of arabidopsis clpt2
c4xhjA_ viral protein/immune system Chain: A: envelope glycoprotein h; ghgl of varicella-zoster virus in complex with human neutralizing2 antibodies.
c4xgmA_ hydrolase Chain: A: mitochondrial ribonuclease p protein 3; structure of the nuclease subunit of human mitochondrial rnase p2 (mrpp3) at 1.98a
c4r7eA_ ligase Chain: A: e3 ubiquitin-protein ligase bre1; structure of bre1 ring domain
c4rejA_ protein binding Chain: A: major latex-like protein; crystal structure of ginseng major latex-like protein 151 (glp) from2 panax ginseng. (crystal-3)
c2mxxA_ hydrolase receptor Chain: A: amylase-binding protein abpa; structure of amylase binding protein a of streptococcous gordonii: a2 potential receptor for human salivary amylase enzyme
c4uzgA_ structural protein Chain: A: surface protein spb1; crystal structure of group b streptococcus pilus 2b2 backbone protein sak_1440
c3j9tb_ hydrolase Chain: B: v-type proton atpase subunit b; yeast v-atpase state 1
c4yzsB_ signaling protein Chain: B: eukaryotic translation initiation factor 2-alpha kinase 3; crystal structures reveal transient perk luminal domain2 tetramerization in er stress signaling
c4yooA_ transcription Chain: A: retinoblastoma-like protein 1,retinoblastoma-like protein p107 pocket domain in complex with lin52 p29a peptide
c4tpuA_ electron transport Chain: A: rubredoxin; crystal structure of ferredoxin-dependent disulfide reductase from2 methanosarcina acetivorans
c4xedA_ protein binding Chain: A: peptidase m14, carboxypeptidase a; pkd domain of m14-like peptidase from thermoplasmatales archaeon scgc2 ab-540-f20
c3x1lH_ rna binding protein/rna/dna Chain: H: cmr6; crystal structure of a cas protein
c4zjuA_ oxidoreductase Chain: A: enoyl-[acyl-carrier-protein] reductase [nadh]; structure of a nadh-dependent enoyl-acp reductase from acinetobacter2 baumannii in complex with nad
c2mzzA_ hydrolase, antiviral protein Chain: A: apolipoprotein b mrna-editing enzyme, catalytic nmr structure of apobec3g ntd variant, sntd


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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