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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2015 May 02

Fold library idPDB HeaderMoleculeTitle
c4x6gG_ dna binding protein Chain: G: oxyr; full-length oxyr c199d from pseudomonas aeruginosa
c4pj1V_ chaperone Chain: V: 10 kda heat shock protein, mitochondrial; crystal structure of the human mitochondrial chaperonin symmetrical2 'football' complex
c4yzhA_ hydrolase/hydrolase substrate Chain: A: protein phosphatase 2c 57; structure of the arabidopsis tap38/pph1 in complex with plhcb12 phosphopeptide substrate
c3wvbA_ hydrolase Chain: A: upf0254 protein mj1251; hcgf from methanocaldococcus jannaschii
c4uftB_ rna binding protein Chain: B: nucleoprotein; structure of the helical measles virus nucleocapsid
c4z9yA_ oxidoreductase Chain: A: 2-deoxy-d-gluconate 3-dehydrogenase; crystal structure of 2-keto-3-deoxy-d-gluconate dehydrogenase from2 pectobacterium carotovorum
c4cg4D_ actin-binding protein Chain: D: pyrin; crystal structure of the chs-b30.2 domains of trim20
c3wv9D_ transferase Chain: D: hmd co-occurring protein hcge; guanylylpyridinol (gp)- and atp-bound hcge from methanothermobacter2 marburgensis
c4xq3F_ rna binding protein Chain: F: like-sm ribonucleoprotein core; crystal structure of sso-smap2
c4xpyA_ oxygen binding protein Chain: A: bacteriohemerythrin; crystal structure of hemerythrin : l114y mutant
c4z1oB_ transferase Chain: B: phosphoribosyltransferase; hypoxanthine-guanine-xanthine phosphoribosyltransferase (hgxprt) from2 sulfolobus solfataricus in complex with alpha-3 phosphoribosylpyrophosphoric acid (prpp) and magnesium
c4pj1E_ chaperone Chain: E: 60 kda heat shock protein, mitochondrial; crystal structure of the human mitochondrial chaperonin symmetrical2 'football' complex
c5ajdH_ transcription Chain: H: general negative regulator of transcription subunit 4; not1 c-terminal domain in complex with not4
c5ajdB_ transcription Chain: B: general negative regulator of transcription subunit 4; not1 c-terminal domain in complex with not4
c4wxjB_ membrane protein Chain: B: glutamate receptor iib,glutamate receptor iib; drosophila muscle gluriib complex with glutamate
c4r0cB_ membrane protein Chain: B: abgt putative transporter family; crystal structure of the alcanivorax borkumensis ydah transporter2 reveals an unusual topology
c4r10A_ cell adhesion/protein binding Chain: A: protein humpback-2; a conserved phosphorylation switch controls the interaction between2 cadherin and beta-catenin in vitro and in vivo
c4r11D_ cell adhesion/protein binding Chain: D: cadherin-related hmr-1; a conserved phosphorylation switch controls the interaction between2 cadherin and beta-catenin in vitro and in vivo
c4us7B_ cell adhesion Chain: B: pild processed protein; sulfur sad phased structure of a type iv pilus protein from2 shewanella oneidensis
c4ypjB_ hydrolase Chain: B: beta galactosidase; x-ray structure of the mutant of glycoside hydrolase
c4pdxB_ hydrolase Chain: B: putative alkyl/aryl-sulfatase yjcs; crystal structure of escherchia coli uncharacterized protein yjcs
c4urpB_ oxidoreductase Chain: B: fatty acid repression mutant protein 2; the crystal structure of nitroreductase from saccharomyces2 cerevisiae
c4u7aA_ protein binding Chain: A: ribosome biogenesis protein erb1; the carboxy-terminal domain of erb1 is a seven-bladed beta-propeller2 that binds rna.
c4ymrB_ protein transport Chain: B: protein snx21; crystal structure of the domain swapped pxb/tpr domain of mouse snx21
c4trtB_ transferase Chain: B: dna polymerase iii subunit beta; deinococcus radiodurans dna polymerase iii subunit beta
c4xhmB_ oxidoreductase Chain: B: thioredoxin (trx-3); archaeoglobus fulgidus thioredoxin 3 m60h
c4ybgA_ hydrolase Chain: A: protein maelstrom; crystal structure of the mael domain of drosophila melanogaster2 maelstrom
c3woaA_ dna binding protein, sugar binding prote Chain: A: repressor protein ci, maltose-binding periplasmic protein; crystal structure of lambda repressor (1-45) fused with maltose-2 binding protein
c4zbgA_ transferase Chain: A: acetyltransferase; crystal structure of a gnat family acetyltransferase from brucella2 melitensis in complex with acetyl-coa
c4z3cC_ dna binding protein/dna Chain: C: methylcytosine dioxygenase; zinc finger region of human tet3 in complex with cpg dna
c4r11F_ cell adhesion/protein binding Chain: F: cadherin-related hmr-1; a conserved phosphorylation switch controls the interaction between2 cadherin and beta-catenin in vitro and in vivo
c4q9dA_ lyase Chain: A: benzoylformate decarboxylase; x-ray structure of a putative thiamin diphosphate-dependent enzyme2 isolated from mycobacterium smegmatis
c5aieA_ ligase Chain: A: general negative regulator of transcription subunit 4; not4 ring domain in complex with ubc4
c4xwiA_ transferase Chain: A: 3-deoxy-manno-octulosonate cytidylyltransferase; x-ray crystal structure of cmp-kdo synthase from pseudomonas2 aeruginosa
c4xj6A_ transferase Chain: A: vc0179-like protein; crystal structure of escherichia coli dncv 3'-deoxy gtp bound form
c4pdtA_ sugar binding protein Chain: A: mannose recognizing lectin; japanese marasmius oreades lectin
c5amoA_ signaling protein Chain: A: noelin; structure of a mouse olfactomedin-1 disulfide-linked dimer2 of the olfactomedin domain and part of the coiled coil


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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