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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2015 Mar 21

Fold library idPDB HeaderMoleculeTitle
c4wx8A_ cell cycle Chain: A: ekc/keops complex subunit pcc1; crystal structure of binary complex gon7-pcc1
c4pewB_ hydrolase Chain: B: putative secreted protein; structure of sactelam55a from streptomyces sp. sirexaa-e
c4u39N_ cell cycle Chain: N: cell division factor; crystal structure of ftsz:mciz complex from bacillus subtilis
c4y7uA_ transferase Chain: A: nucleotidyl transferase; structural analysis of muru
c4ygtA_ structural genomics unknown function Chain: A: uncharacterized protein yjgb; crystal structure of a duf4309 family protein (yjgb) from bacillus2 subtilis subsp. subtilis str. 168 at 2.13 a resolution
c4xjnM_ viral protein/rna Chain: M: nucleocapsid; structure of the parainfluenza virus 5 nucleocapsid-rna complex: an2 insight into paramyxovirus polymerase activity
c4u39M_ cell cycle Chain: M: cell division factor; crystal structure of ftsz:mciz complex from bacillus subtilis
c4y66C_ cell cycle Chain: C: mnd1; crystal structure of giardia lamblia hop2-mnd1 complex
c4xjcD_ hydrolase Chain: D: deoxycytidine triphosphate deaminase; dctp deaminase-dutpase from bacillus halodurans
c4xi7A_ ligase Chain: A: e3 ubiquitin-protein ligase mib1; crystal structure of the mzm-rep domains of mind bomb 1 in complex2 with jagged1 n-box peptide
c4tseA_ ligase Chain: A: e3 ubiquitin-protein ligase mib1; crystal structure of the mib repeat domain of mind bomb 1
c4pxlB_ oxidoreductase Chain: B: cytosolic aldehyde dehydrogenase rf2c; structure of zm aldh2-3 (rf2c) in complex with nad
c4qkvB_ transcription Chain: B: polymerase i and transcript release factor; crystal structure of the mouse cavin1 hr1 domain
c4xplA_ transferase Chain: A: n-acetyltransferase, pseh; the crystal structure of campylobacter jejuni n-acetyltransferase pseh2 in complex with acetyl coenzyme a
c4y66D_ cell cycle Chain: D: putative tbpip family protein; crystal structure of giardia lamblia hop2-mnd1 complex
c3j9oJ_ structural protein Chain: J: intracellular growth locus protein b; cryoem structure of a type vi secretion system
c4wxaE_ transcription Chain: E: ekc/keops complex subunit gon7; crystal structure of binary complex gon7-pcc1
c4d7lB_ oxidoreductase Chain: B: peptide methionine sulfoxide reductase msra; methionine sulfoxide reductase a of corynebacterium diphtheriae
c5afbA_ signaling protein Chain: A: latrophilin-3; crystal structure of the latrophilin3 lectin and2 olfactomedin domains
c4x0pB_ transferase/dna Chain: B: dna polymerase theta; ternary complex of human dna polymerase theta c-terminal domain2 binding ddatp opposite a tetrahydrofuran ap site analog
c4udpA_ oxidoreductase Chain: A: glucose-methanol-choline oxidoreductase; crystal structure of 5-hydroxymethylfurfural oxidase (hmfo)2 in the oxidized state
c4u39L_ cell cycle Chain: L: cell division factor; crystal structure of ftsz:mciz complex from bacillus subtilis
c4ycsC_ hydrolase Chain: C: uncharacterized protein; crystal structure of putative lipoprotein from peptoclostridium2 difficile 630 (fragment)
c4ww7A_ transferase Chain: A: ekc/keops complex subunit bud32; crystal structure of binary complex bud32-cgi121 in complex with amp
c4oz9A_ lyase Chain: A: membrane-bound lytic murein transglycosylase f; crystal structure of mltf from pseudomonas aeruginosa complexed with2 isoleucine
c3j9oA_ structural protein Chain: A: intracellular growth locus protein a; cryoem structure of a type vi secretion system
c4qkwB_ signaling protein Chain: B: muscle-related coiled-coil protein; crystal structure of the zebrafish cavin4a hr1 domain
c4xtrG_ hydrolase/transport protein Chain: G: pep12p; structure of get3 bound to the transmembrane domain of pep12
c4d2gE_ transcription Chain: E: p15; crystal structure of human pcna in complex with p15 peptide
c5af2C_ hydrolase Chain: C: vp3; crystal structure of the c-terminal 2',5'-phosphodiesterase2 domain of group a rotavirus protein vp3
c4wrpB_ structural genomics, unknown function Chain: B: uncharacterized protein; the c-terminal domain of gene product lpg0944 from legionella2 pneumophila subsp. pneumophila str. philadelphia 1
c4yhsA_ solute-binding protein Chain: A: monosaccharide abc transporter substrate-binding protein, crystal structure of an abc transporter solute binding protein2 (ipr025997) from bradyrhizobium sp. btai1 (bbta_2440, target efi-3 511490) with bound bis-tris
c3wyrA_ immune system Chain: A: killer cell immunoglobulin-like receptor 2dl4; crystal structure of killer cell immunoglobulin-like receptor 2dl4
c4wkrB_ rna-binding protein Chain: B: la-related protein 7; larp7 wrapping up the 3' hairpin of 7sk non-coding rna (302-332)
c4pxnB_ oxidoreductase Chain: B: uncharacterized protein; structure of zm aldh7 in complex with nad
c4wpyA_ de novo protein Chain: A: protein dl-rv1738; racemic crystal structure of rv1738 from mycobacterium tuberculosis2 (form-ii)
c4ye5A_ penicillin binding protein Chain: A: peptidoglycan synthetase penicillin-binding protein 3; the crystal structure of a peptidoglycan synthetase from2 bifidobacterium adolescentis atcc 15703
c4ow5A_ viral protein Chain: A: fusolin; structural basis for the enhancement of virulence by entomopoxvirus2 fusolin and its in vivo crystallization into viral spindles
c4cy8A_ oxidoreductase Chain: A: 2-hydroxybiphenyl 3-monooxygenase; 2-hydroxybiphenyl 3-monooxygenase (hbpa) in complex with fad
c4wjlB_ membrane protein Chain: B: inactive dipeptidyl peptidase 10; structure of human dipeptidyl peptidase 10 (dppy): a modulator of2 neuronal kv4 channels
c4y93A_ transferase Chain: A: non-specific protein-tyrosine kinase,non-specific protein- crystal structure of the ph-th-kinase construct of bruton's tyrosine2 kinase (btk)
c4wwaB_ transferase Chain: B: ekc/keops complex subunit cgi121; crystal structure of binary complex bud32-cgi121
c4d2gD_ transcription Chain: D: p15; crystal structure of human pcna in complex with p15 peptide
c4v12A_ oxidoreductase Chain: A: maoc like domain protein; crystal structure of the msmeg_6754 dehydratase from mycobacterium2 smegmatis
c4tweA_ hydrolase Chain: A: n-acetylated-alpha-linked acidic dipeptidase-like protein; structure of ligand-free n-acetylated-alpha-linked-acidic-dipeptidase2 like protein (naaladasel)
c4p2bA_ ligase Chain: A: glutamine aminoacyl-trna synthetase; crystal structure of the apo form of the glutaminyl-trna synthetase2 catalytic domain from toxoplasma gondii.
c4s1wA_ transferase Chain: A: glutamine--fructose-6-phosphate aminotransferase structure of a putative glutamine--fructose-6-phosphate2 aminotransferase from staphylococcus aureus subsp. aureus mu50
c4xeaA_ hydrolase Chain: A: peptidase m16 domain protein; crystal structure of putative m16-like peptidase from alicyclobacillus2 acidocaldarius
c4u39P_ cell cycle Chain: P: cell division factor; crystal structure of ftsz:mciz complex from bacillus subtilis
c4q6xA_ lyase Chain: A: phospholipase d stsictox-betaic1; structure of phospholipase d beta1b1i from sicarius terrosus venom at2 2.14 a resolution
c4rvcA_ transport protein Chain: A: abc transporter atp-binding protein; structure of atp binding subunit of abc transporter
c4yjwA_ structural genomics unknown function Chain: A: duf3829 family protein; crystal structure of a duf3829 family protein (bvu_3067) from2 bacteroides vulgatus atcc 8482 at 1.80 a resolution
c4u39J_ cell cycle Chain: J: cell division factor; crystal structure of ftsz:mciz complex from bacillus subtilis
c2mniA_ unknown function Chain: A: hp_q4d059; chemical shift assignments and structure of q4d059, a hypothetical2 protein from trypanosoma cruzi
c4u39Q_ cell cycle Chain: Q: cell division factor; crystal structure of ftsz:mciz complex from bacillus subtilis


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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