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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2015 Mar 14

Fold library idPDB HeaderMoleculeTitle
c4v1xA_ hydrolase Chain: A: atrazine chlorohydrolase; the structure of the hexameric atrazine chlorohydrolase, atza
c4qqsB_ hydrolase Chain: B: glycoside hydrolase family 43; crystal structure of a thermostable family-43 glycoside hydrolase
c4yfvA_ transferase Chain: A: viof; x-ray structure of the 4-n-formyltransferase viof from providencia2 alcalifaciens o30
c4r3uB_ isomerase Chain: B: 2-hydroxyisobutyryl-coa mutase large subunit; crystal structure of 2-hydroxyisobutyryl-coa mutase
c4rwzA_ transferase Chain: A: putative rrna methyltransferase; crystal structure of the antibiotic-resistance methyltransferase kmr
c4w86B_ hydrolase Chain: B: xyloglucan-specific endo-beta-1,4-glucanase; crystal structure of xeg5a, a gh5 xyloglucan-specific endo-beta-1,4-2 glucanase from ruminal metagenomic library, in complex with glucose3 and tris
c5afuB_ motor protein Chain: B: dynactin; cryo-em structure of dynein tail-dynactin-bicd2n complex
c4u7kB_ hydrolase Chain: B: colh protein; crystal structure of the clostridium histolyticum colh collagenase2 polycystic kidney disease-like domain 2a in the presence of calcium3 at 1.9 angstrom resolution
c4xviA_ transferase/dna Chain: A: dna polymerase nu; binary complex of human polymerase nu and dna with the finger domain2 ajar
c4x0fA_ hydrolase/hydrolase inhibitor Chain: A: camp-specific 3',5'-cyclic phosphodiesterase 4b; crystal structure of crosslink stabilized long-form pde4b in complex2 with (r)-(-)-rolipram
c4rkdA_ transferase Chain: A: aromatic amino acid aminotransferase; psychrophilic aromatic amino acids aminotransferase from psychrobacter2 sp. b6 cocrystalized with aspartic acid
c4pt3C_ oxidoreductase Chain: C: aldehyde dehydrogenase; nadph complex structure of aldehyde dehydrogenase from bacillus cereus
c4mjtH_ toxin Chain: H: monalysin; crystal structure of the oligomeric pore-forming toxin pro-monalysin
c4qkhB_ immune system Chain: B: c-type lectin domain family 2 member d; dimeric form of human llt1, a ligand for nkr-p1
c4uriB_ hydrolase Chain: B: chitinase-related agglutinin; crystal structure of chitinase-like agglutinin robpscra2 from robinia pseudoacacia
c5afuV_ motor protein Chain: V: dynactin; cryo-em structure of dynein tail-dynactin-bicd2n complex
c4tq0B_ protein binding Chain: B: autophagy-related protein 16-1; crystal structure of human atg5-atg16n69
c4q2jA_ dna binding protein Chain: A: dna-binding protein satb1; a novel structure-based mechanism for dna-binding of satb1
c5aftJ_ motor protein Chain: J: actin related protein 11; cryoem structure of dynactin complex at 4.0 angstrom2 resolution
c4w8aA_ hydrolase Chain: A: exo-xyloglucanase; crystal structure of xeg5b, a gh5 xyloglucan-specific beta-1,4-2 glucanase from ruminal metagenomic library, in the native form
c4yerB_ hydrolase Chain: B: abc transporter atp-binding protein; crystal structure of an abc transporter atp-binding protein (tm_1403)2 from thermotoga maritima msb8 at 2.35 a resolution
c4ml8C_ oxidoreductase Chain: C: cytokinin oxidase 2; structure of maize cytokinin oxidase/dehydrogenase 2 (zmcko2)
c4px9C_ translation, rna binding protein Chain: C: atp-dependent rna helicase ddx3x; dead-box rna helicase ddx3x domain 1 with n-terminal atp-binding loop
c5aftd_ motor protein Chain: D: actin related protein 1; cryoem structure of dynactin complex at 4.0 angstrom2 resolution
c4x91C_ transferase Chain: C: group xv phospholipase a2; crystal structure of lysosomal phospholipase a2 in complex with2 isopropyl dodec-11-enylfluorophosphonate (idfp)
c5aftb_ motor protein Chain: B: actin related protein 1; cryoem structure of dynactin complex at 4.0 angstrom2 resolution
c4mkqA_ toxin Chain: A: monalysin; crystal structure of the pore-forming toxin monalysin mutant deleted2 of the membrane-spanning domain
c4r3uD_ isomerase Chain: D: 2-hydroxyisobutyryl-coa mutase small subunit; crystal structure of 2-hydroxyisobutyryl-coa mutase
c5afuU_ motor protein Chain: U: dynactin; cryo-em structure of dynein tail-dynactin-bicd2n complex
c4y9tA_ solute-binding protein Chain: A: abc transporter, solute binding protein; crystal structure of an abc transporter solute binding protein2 (ipr025997) from agrobacterium vitis s4 (avi_5305, target efi-511224)3 with bound alpha-d-glucosamine
c2my1A_ splicing Chain: A: pre-mrna-splicing factor bud31; solution structure of bud31p
c4xfkA_ transport protein Chain: A: putative branched chain amino acid abc transporter, crystal structure of leucine-, isoleucine-, valine-, threonine-, and2 alanine-binding protein from brucella ovis
c4yguB_ cell adhesion Chain: B: putative adhesin; crystal structure of a putative adhesin (bacegg_01763) from2 bacteroides eggerthii dsm 20697 at 2.20 a resolution
c5aftc_ motor protein Chain: C: actin related protein 1; cryoem structure of dynactin complex at 4.0 angstrom2 resolution
c4rswB_ signaling protein Chain: B: hopa1; the structure of the effector protein from pseudomonas syringae pv.2 syringae strain 61
c4pcvB_ oxidoreductase Chain: B: bdca (yjgi); the structure of bdca (yjgi) from e. coli
c4psuA_ hydrolase Chain: A: alpha/beta hydrolase; crystal structure of alpha/beta hydrolase from rhodopseudomonas2 palustris cga009
c4xbmB_ signaling protein Chain: B: delta-like protein 1; x-ray crystal structure of notch ligand delta-like 1
c2mrpA_ ubiquitin-binding protein Chain: A: dna damage-inducible protein 1; nmr solution structure of the ubiquitin like domain (ubl) of dna-2 damage-inducible 1 protein (ddi1)
c4tq1B_ protein binding Chain: B: tectonin beta-propeller repeat-containing protein 1; crystal structure of human atg5-tecair
c4qciL_ cytokine/cytokine receptor Chain: L: anti-pdgf-bb antibody - light chain; pdgf-b blocking antibody bound to pdgf-bb
c4txaA_ rna binding protein Chain: A: roquin-1; crystal structure of n-terminus of roquin
c2mpeA_ unknown function Chain: A: bpsl1050; solution nmr structure for b. pseudomallei bpsl1050
c5afuc_ motor protein Chain: C: dynactin; cryo-em structure of dynein tail-dynactin-bicd2n complex
c4rsxA_ signaling protein Chain: A: type iii effector hopa1; the structure of the effector protein from pseudomonas syringae pv.2 tomato strain dc3000
c4rnzA_ hydrolase Chain: A: conserved hypothetical secreted protein; structure of helicobacter pylori csd3 from the hexagonal crystal
c4y5jA_ protein binding Chain: A: mini spindles tog3; drosophila melanogaster mini spindles tog3
c4yg8A_ transport protein Chain: A: chitin biosynthesis protein chs5; crystal structure of the chs5-chs6 exomer cargo adaptor complex
c4ps2A_ contractile protein Chain: A: putative type vi secretion protein; structure of the c-terminal fragment (87-165) of e.coli eaec tssb2 molecule
c4pxaA_ translation, rna binding protein Chain: A: atp-dependent rna helicase ddx3x; dead-box rna helicase ddx3x cancer-associated mutant d354v
c4tq0D_ protein binding Chain: D: autophagy-related protein 16-1; crystal structure of human atg5-atg16n69


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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