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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2015 Jan 24

Fold library idPDB HeaderMoleculeTitle
c2mjlA_ hydrolase Chain: A: peptidyl-trna hydrolase; solution structure of peptidyl-trna hyrolase from vibrio cholerae
c4oicB_ hormone receptor/hydrolase Chain: B: probable protein phosphatase 2c 6; crystal structrual of a soluble protein
c4x8fD_ transferase Chain: D: ribokinase; vibrio cholerae o395 ribokinase in apo form
c4pv6E_ transferase Chain: E: n-terminal acetyltransferase complex subunit [ard1]; crystal structure analysis of ard1 from thermoplasma volcanium
c4cbmA_ hydrolase Chain: A: serine protease ns3; pestivirus ns3 helicase
c4s12C_ lyase Chain: C: n-acetylmuramic acid 6-phosphate etherase; 1.55 angstrom crystal structure of n-acetylmuramic acid 6-phosphate2 etherase from yersinia enterocolitica.
c4x0gB_ dna binding protein/dna Chain: B: blastoderm-specific gene 25a; structure of bsg25a binding with dna
c4rz0B_ transferase Chain: B: pfl0690c; crystal structure of plasmodium falciparum putative histone2 methyltransferase pfl0690c
c4v0bA_ hydrolase Chain: A: atp-dependent zinc metalloprotease ftsh; escherichia coli ftsh hexameric n-domain
c3wrnA_ replication Chain: A: non-capsid protein ns-1; minute virus of mice non-structural protein-1n-terminal nuclease2 domain reveals a unique zn2+ coordination in the active site pocket3 and shows a novel mode of dna recognition at the origin of4 replication
c4d5tC_ viral protein Chain: C: protein a49r; structure of n-terminally truncated a49 from vaccinia virus2 western reserve
c4rpaA_ hydrolase Chain: A: probable manganese-dependent inorganic pyrophosphatase; crystal structure of inorganic pyrophosphatase from staphylococcus2 aureus in complex with mn2+
c4rxxA_ hydrolase Chain: A: ubiquitin carboxyl-terminal hydrolase 38; crystal structure of the n-terminal domain of human ubiquitin specific2 protease 38
c4wb7I_ transferase/transferase inhibitor Chain: I: pki (5-24); crystal structure of a chimeric fusion of human dnaj (hsp40) and camp-2 dependent protein kinase a (catalytic alpha subunit)
c4xl8B_ viral protein Chain: B: fiber-1; crystal structure of human adenovirus 52 short fiber knob in complex2 with 2-o-methyl-5-n-acetylneuraminic acid
c4x5mB_ transport protein Chain: B: uncharacterized protein; crystal structure of semisweet in the inward-open conformation
c4xd0A_ transferase Chain: A: tdp-3-aminoquinovose-n-formyltransferase; x-ray structure of the n-formyltransferase qdtf from providencia2 alcalifaciens
c4oxwA_ de novo protein Chain: A: designed cisk-px domain; x-ray structure of a designed cisk-px domain
c4rxwA_ hormone Chain: A: insulin a chain; crystal structure of the cobalt human insulin derivative
c4tziA_ transferase Chain: A: tyrosine-protein kinase lyn; structure of unliganded lyn sh2 domain
c4wb8I_ transferase/transferase inhibitor Chain: I: pki (5-24); crystal structure of human camp-dependent protein kinase a (catalytic2 alpha subunit), exon 1 deletion
c4xk2A_ oxidoreductase Chain: A: aldo/keto reductase; crystal structure of aldo-keto reductase from polaromonas sp. js666
c4rr2D_ transferase Chain: D: dna primase large subunit; crystal structure of human primase
c4wb7J_ transferase/transferase inhibitor Chain: J: pki (5-24); crystal structure of a chimeric fusion of human dnaj (hsp40) and camp-2 dependent protein kinase a (catalytic alpha subunit)
c4xdiB_ heme binding protein Chain: B: chlamydomonas reinhardtii thb1; structure of chlamydomonas reinhardtii thb1
c4nl6C_ splicing Chain: C: survival motor neuron protein; structure of the full-length form of the protein smn found in healthy2 patients
c4wweA_ ribosome Chain: A: 50s ribosomal protein l1; crystal structure of bactobolin a bound to 70s ribosome-trna complex
c4x3fA_ transferase Chain: A: serine/threonine-protein kinase pkna; crystal structure of the intracellular domain of the m. tuberculosis2 ser/thr kinase pkna
c4wwtA_ ribosome Chain: A: 50s ribosomal protein l1; crystal structure of bactobolin a bound to 70s ribosome-trna complex
c4cbhD_ hydrolase Chain: D: serine protease ns3; pestivirus ns3 helicase
c4wb5I_ transferase/transferase inhibitor Chain: I: pki (5-24); crystal structure of human camp-dependent protein kinase a (catalytic2 alpha subunit)
c3wtfB_ immune system Chain: B: uncharacterized protein c9orf142; structure of paxx
c4o1fB_ transferase Chain: B: dihydropteroate synthase dhps; structure of a methyltransferase component in complex with thf2 involved in o-demethylation
c3x29A_ cell adhesion Chain: A: claudin-19; crystal structure of mouse claudin-19 in complex with c-terminal2 fragment of clostridium perfringens enterotoxin
c4ri7A_ transferase Chain: A: phi class glutathione transferase gstf1; crystal structure of poplar glutathione transferase f1 mutant ser 132 cys
c4cbhC_ hydrolase Chain: C: serine protease ns3; pestivirus ns3 helicase
c4wb7B_ transferase/transferase inhibitor Chain: B: dnaj homolog subfamily b member 1,camp-dependent protein crystal structure of a chimeric fusion of human dnaj (hsp40) and camp-2 dependent protein kinase a (catalytic alpha subunit)
c4wusW_ ribosome Chain: W: 30s ribosomal protein thx; crystal structure of bactobolin a bound to 70s ribosome-trna complex
c4oicA_ hormone receptor/hydrolase Chain: A: bet v i allergen-like; crystal structrual of a soluble protein
c4wb6I_ transferase/transferase inhibitor Chain: I: pki (5-24); crystal structure of a l205r mutant of human camp-dependent protein2 kinase a (catalytic alpha subunit)
c4ohnA_ transport protein Chain: A: abc transporter substrate-binding protein; crystal structure of an abc uptake transporter substrate binding2 protein from streptococcus pneumoniae with bound histidine
c3x17B_ hydrolase Chain: B: endoglucanase; crystal structure of metagenome-derived glycoside hydrolase family 92 endoglucanase
c4pj3A_ rna binding protein Chain: A: intron-binding protein aquarius; structural insight into the function and evolution of the spliceosomal2 helicase aquarius, structure of aquarius in complex with amppnp
c4wb6J_ transferase/transferase inhibitor Chain: J: pki (5-24); crystal structure of a l205r mutant of human camp-dependent protein2 kinase a (catalytic alpha subunit)
c4wt8W_ ribosome Chain: W: 30s ribosomal protein thx; crystal structure of bactobolin a bound to 70s ribosome-trna complex
c2mxtA_ splicing Chain: A: heterogeneous nuclear ribonucleoprotein q; nmr structure of the acidic domain of syncrip (hnrnpq)
c4rxwC_ hormone Chain: C: insulin a chain; crystal structure of the cobalt human insulin derivative


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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