Standard Mode | Switch to Expert Mode | Login to view past jobs Retrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2014 Sep 20

Fold library idPDB HeaderMoleculeTitle
c4qnuH_ transferase Chain: H: trna (mo5u34)-methyltransferase; crystal structure of cmob bound with cx-sam in p21212
c4mnoA_ translation Chain: A: translation initiation factor 1a; crystal structure of aif1a from pyrococcus abyssi
c4tlxC_ oxidoreductase Chain: C: ktzi; kutzneria sp. 744 ornithine n-hydroxylase, ktzi-fadred-nadp+-l-orn
c4r9nA_ transcription Chain: A: lmo0547 protein; deor family transcriptional regulator from listeria monocytogenes.
c4mm0B_ oxidoreductase Chain: B: p450-like monooxygenase; crystal structure analysis of the putative thioether synthase sgvp2 involved in the tailoring step of griseoviridin
c4m8aA_ hydrolase Chain: A: atp-dependent zinc metalloprotease ftsh; crystal structure of thermotoga maritima ftsh periplasmic domain
c4m85C_ transferase Chain: C: n-acetyltransferase; crystal structure of n-acetyltransferase from staphylococcus aureus2 mu50
c4w8kB_ viral protein Chain: B: cas1 protein; crystal structure of a putative cas1 enzyme from vibrio phage icp1
c2mdlA_ antimicrobial protein Chain: A: anti-lipopolysaccharide factor; structure and nmr assignments of scylla serrata anti2 lipopolysaccharide factor-24 (ssalf-24)
c4mnmA_ hydrolase Chain: A: chitinase a; crystal structure of gh18 chitinase (g77w/e119q mutant) from cycas2 revoluta in complex with (glcnac)4
c4r60A_ hydrolase Chain: A: proline dipeptidase; crystal structure of xaa-pro dipeptidase from xanthomonas campestris
c4mlgF_ hydrolase Chain: F: beta-xylosidase; structure of rs223-beta-xylosidase
c4pfwA_ transport protein Chain: A: abc transporter substrate-binding protein; crystal structure of mannohexaose bound oligopeptide abc transporter,2 periplasmic oligopeptide-binding protein (tm1226) from thermotoga3 maritima at 2.2 a resolution
c4uzmA_ structural protein Chain: A: putative membrane protein igaa homolog; shotgun proteolysis: a practical application
c4tr2A_ hydrolase Chain: A: subtilisin-like 1 serine protease; crystal structure of pvsub1
c4qoyC_ oxidoreductase Chain: C: pyruvate dehydrogenase e1 component; novel binding motif, and new flexibility revealed by structural2 analysis of a pyruvate dehydrogenase-dihydrolipoyl acetyltransferase3 sub-complex from the escherichia coli pyruvate dehydrogenase multi-4 enzyme complex
c4jkmB_ hydrolase Chain: B: beta-glucuronidase; crystal structure of clostridium perfringens beta-glucuronidase
c4mo0A_ translation Chain: A: protein translation factor sui1 homolog; crystal structure of aif1 from methanocaldococcus jannaschii
c4wd6B_ hydrolase Chain: B: metallo-beta-lactamase; crystal structure of dim-1 metallo-beta-lactamase
c4r8oB_ structural genomics, unknown function Chain: B: uncharacterized protein; crystal structure of a hypothetical protein (bvu_1206) from2 bacteroides vulgatus atcc 8482 at 2.50 a resolution
c4u48A_ hydrolase inhibitor Chain: A: putative inner membrane lipoprotein; crystal structure of salmonella alpha-2-macroglobulin
c4psdA_ hydrolase Chain: A: carbohydrate esterase family 5; structure of trichoderma reesei cutinase native form.
c4jklA_ hydrolase Chain: A: beta-glucuronidase; crystal structure of streptococcus agalactiae beta-glucuronidase in2 space group p21212
c4cawA_ transferase Chain: A: glycylpeptide n-tetradecanoyltransferase; crystal structure of aspergillus fumigatus n-myristoyl2 transferase in complex with myristoyl coa and a pyrazole3 sulphonamide ligand
c2mkaB_ immune system Chain: B: toll-like receptor 3; spatial structure of the toll-like receptor 3 transmembrane domain in2 the trimeric state
c2mkaA_ immune system Chain: A: toll-like receptor 3; spatial structure of the toll-like receptor 3 transmembrane domain in2 the trimeric state
c4q1qA_ cell adhesion Chain: A: adhesin/invasin tiba autotransporter; crystal structure of tibc-catalyzed hyper-glycosylated tiba55-3502 fragment
c4ph6A_ lyase Chain: A: 3-dehydroquinate dehydratase; structure of 3-dehydroquinate dehydratase from enterococcus faecalis
c2mu0A_ oxidoreductase Chain: A: arsenate reductase; solution structure of a putative arsenate reductase from brucella2 melitensis. seattle structural genomics center for infectious disease3 target braba.00073.a
c4klzA_ protein binding Chain: A: gtp-binding protein rit1; inhibition of small gtpases by stabilization of the gdp complex, a2 novel approach applied to rit1, a target for rheumatoid arthritis
c4r9xB_ metal transport Chain: B: copper homeostasis protein cutc; crystal structure of putative copper homeostasis protein cutc from2 bacillus anthracis
c4q66J_ protein transport Chain: J: chs5p; structure of exomer bound to arf1.
c4pufA_ ligase/oxidoreductase Chain: A: e3 ubiquitin-protein ligase slrp; complex between the salmonella t3ss effector slrp and its human target2 thioredoxin-1
c4r33A_ lyase Chain: A: nosl; x-ray structure of the tryptophan lyase nosl with tryptophan and s-2 adenosyl-l-homocysteine bound
c4p7xA_ oxidoreductase Chain: A: l-proline cis-4-hydroxylase; l-pipecolic acid-bound l-proline cis-4-hydroxylase
c2mk9B_ immune system Chain: B: toll-like receptor 3; spatial structure of the dimeric transmembrane domain of toll-like2 receptor 3
c4q77B_ dna binding protein Chain: B: hth-type transcriptional regulator rot; crystal structure of rot, a global regulator of virulence genes in2 staphylococcus aureus
c2mkaC_ immune system Chain: C: toll-like receptor 3; spatial structure of the toll-like receptor 3 transmembrane domain in2 the trimeric state
c2mraA_ de novo protein Chain: A: de novo designed protein or459; solution nmr structure of de novo designed protein, northeast2 structural genomics consortium (nesg) target or459
c4w8jA_ toxin Chain: A: pesticidal crystal protein cry1ac; structure of the full-length insecticidal protein cry1ac reveals2 intriguing details of toxin packaging into in vivo formed crystals
c4qt8A_ hydrolase/signaling protein Chain: A: macrophage-stimulating protein receptor; crystal structure of ron sema-psi-ipt1 extracellular domains in2 complex with msp beta-chain
c2mn3A_ antimicrobial protein Chain: A: defensin-bvl; structure of platypus 'intermediate' defensin-like peptide (int-dlp)
c4mq3A_ viral protein Chain: A: integrase; the 1.1 angstrom structure of catalytic core domain of fiv integrase
c4wb1B_ oxidoreductase Chain: B: cals8; crystal structure of cals8 from micromonospora echinospora (p294s2 mutant)
c4noxA_ translation Chain: A: eukaryotic translation initiation factor 3 subunit b; crystal structure of a beta propeller
c4lzlA_ transcription Chain: A: response regulator; structure of the inactive form of the regulatory domain from the2 repressor of iron transport regulator (ritr)
c4r12A_ protein binding Chain: A: putative uncharacterized protein; crystal structure of the gamma-secretase component nicastrin
c2mk9A_ immune system Chain: A: toll-like receptor 3; spatial structure of the dimeric transmembrane domain of toll-like2 receptor 3
c4qoyE_ oxidoreductase Chain: E: pyruvate dehydrogenase (dihydrolipoyltransacetylase novel binding motif, and new flexibility revealed by structural2 analysis of a pyruvate dehydrogenase-dihydrolipoyl acetyltransferase3 sub-complex from the escherichia coli pyruvate dehydrogenase multi-4 enzyme complex
c4r4fR_ viral protein/immune system/inhibitor Chain: R: m48u1 peptide; crystal structure of non-neutralizing, a32-like antibody 2.2c in2 complex with hiv-1 yu2 gp120
c4uvqA_ hydrolase Chain: A: thiazoline oxidase/subtilisin-like protease; patg domain of unknown function
c2mitA_ antimicrobial protein Chain: A: defensin-5; solution structure of oxidized dimeric form of human defensin 5
c2m5rA_ lipid binding protein Chain: A: acyl carrier protein; solution structure of holo-acyl carrier protein of leishmania major
c4r4gA_ structural genomics, unknown function Chain: A: putative lipoprotein ycda; crystal structure of a putative lipoprotein (ycda) from bacillus2 subtilis subsp. subtilis str. 168 at 2.62 a resolution
c2mitB_ antimicrobial protein Chain: B: defensin-5; solution structure of oxidized dimeric form of human defensin 5


Phyre is for non-commercial use only

Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
Disclaimer
Terms and Conditions

Phyre2 is part of Genome3D