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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2014 Aug 16

Fold library idPDB HeaderMoleculeTitle
c4tvxS_ hydrolase/rna Chain: S: crispr system cascade subunit casc; crystal structure of the e. coli crispr rna-guided surveillance2 complex, cascade
c4tvxK_ hydrolase/rna Chain: K: crispr system cascade subunit casb; crystal structure of the e. coli crispr rna-guided surveillance2 complex, cascade
c4u5hC_ toxin Chain: C: con-ikot-ikot; crystal structure of con-ikot-ikot toxin
c4umwA_ hydrolase Chain: A: zinc-transporting atpase; crystal structure of a zinc-transporting pib-type atpase in2 e2.pi state
c4co6A_ chaperone Chain: A: nucleoprotein; crystal structure of the nipah virus rna free2 nucleoprotein-phosphoprotein complex
c4ou6A_ replication/dna Chain: A: primosomal protein 1; crystal structure of dnat84-153-dt10 ssdna complex form 1
c4txyA_ transferase Chain: A: cyclic amp-gmp synthase; crystal structure of vibrio cholerae dncv cyclic amp-gmp synthase, a2 prokaryotic cgas homolog
c4co6D_ chaperone Chain: D: phosphoprotein; crystal structure of the nipah virus rna free2 nucleoprotein-phosphoprotein complex
c4nz3A_ hydrolase Chain: A: deacetylase da1; structure of vibrio cholerae chitin de-n-acetylase
c3wg9D_ transcription Chain: D: redox-sensing transcriptional repressor rex; crystal structure of rsp, a rex-family repressor
c4uqqD_ transport protein Chain: D: glutamate receptor ionotropic, kainate 2; electron density map of gluk2 desensitized state in2 complex with 2s,4r-4-methylglutamate
c3wrwE_ transferase Chain: E: tm-1 protein; crystal structure of the n-terminal domain of resistance protein
c4u1gA_ immune system Chain: A: reticulocyte binding protein 5; plasmodium falciparum reticulocyte-binding protein homologue 5 (pfrh5)2 bound to monoclonal antibody qa1
c4tvxT_ hydrolase/rna Chain: T: crispr system cascade subunit casd; crystal structure of the e. coli crispr rna-guided surveillance2 complex, cascade
c4qtkB_ transcription/dna Chain: B: white-opaque regulator 1; complex of wopr domain of wor1 in candida albicans with the 17bp dsdna
c2mgzA_ rna binding protein/rna Chain: A: protein asd-1, isoform a; solution structure of rbfox family asd-1 rrm and sup-12 rrm in ternary2 complex with rna
c4tq2A_ lyase Chain: A: putative phycoerythrin lyase; structure of s-type phycobiliprotein lyase cpes from guillardia theta
c4q86B_ protein binding Chain: B: ribosomal protein s12 methylthiotransferase accessory ycao bound with amp
c4u65A_ transferase/hydrolase Chain: A: two component histidine kinase, ggdef domain protein/eal structure of the periplasmic output domain of the legionella2 pneumophila lapd ortholog cdgs9 in complex with pseudomonas3 fluorescens lapg
c4tvxU_ hydrolase/rna Chain: U: crispr system cascade subunit casa; crystal structure of the e. coli crispr rna-guided surveillance2 complex, cascade
c4qu7B_ rna binding protein/rna Chain: B: g-rich sequence factor 1; crystal structure of a g-rich rna sequence binding factor 1 (grsf1)2 from homo sapiens at 2.50 a resolution
c4twaA_ ligase Chain: A: proline--trna ligase; crystal structure of prolyl-trna synthetase (prs) from plasmodium2 falciparum
c4o0lA_ oxidoreductase Chain: A: nadph-dependent 3-quinuclidinone reductase; crystal structure of nadph-dependent 3-quinuclidinone reductase from2 rhodotorula rubra
c4u65F_ transferase/hydrolase Chain: F: putative cystine protease; structure of the periplasmic output domain of the legionella2 pneumophila lapd ortholog cdgs9 in complex with pseudomonas3 fluorescens lapg
c3wjaA_ oxidoreductase Chain: A: nadp-dependent malic enzyme; the crystal structure of human cytosolic nadp(+)-dependent malic2 enzyme in apo form
c4mt6A_ protein binding Chain: A: rho guanine nucleotide exchange factor 9; crystal structure of closed inactive collybistin
c4q65A_ transport protein Chain: A: dipeptide permease d; structure of the e. coli peptide transporter ybgh
c4ot1A_ viral protein/immune system Chain: A: envelope glycoprotein b; structural basis for the recognition of human cytomegalovirus2 glycoprotein b by the neutralizing human antibody sm5-1
c1vy0U_ ribosome Chain: U: 30s ribosomal protein thx; crystal structure of unmodified trna proline (cgg) bound to codon ccg2 on the ribosome
c4o5pB_ hydrolase Chain: B: uncharacterized protein; crystal structure of an uncharacterized protein from pseudomonas2 aeruginosa
c1vy2U_ ribosome Chain: U: 30s ribosomal protein thx; crystal structure of unmodified trna proline (cgg) bound to codon ccg2 on the ribosome
c4pmkA_ plant protein Chain: A: kiwellin; crystal structure of kiwellin
c4qpwA_ hydrolase Chain: A: glycosyl hydrolase family 10; bixyn10a cbm1 with xylohexaose bound
c4qn1A_ unknown function Chain: A: e3 ubiquitin-protein ligase shprh; crystal structure of a function uncharacterized domain of e3 ubiquitin2 ligase shprh
c4u77A_ transcription Chain: A: centrosome-associated zinc finger protein cp190; btb domain from drosophila cp190
c4qniA_ structural genomics, unknown function Chain: A: uncharacterized protein; crystal structure of a hypothetical protein (bt3507) from bacteroides2 thetaiotaomicron vpi-5482 at 2.30 a resolution


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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