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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2014 Jul 12

Fold library idPDB HeaderMoleculeTitle
c4qmjA_ protein binding Chain: A: cytoskeleton-associated protein 5; the xmap215 family drives microtubule polymerization using a2 structurally diverse tog array
c3wdvB_ hydrolase Chain: B: beta-1,3-1,4-glucanase; the complex structure of ptlic16a with cellotetraose
c4q33F_ oxidoreductase Chain: F: inosine-5'-monophosphate dehydrogenase; crystal structure of inosine 5'-monophosphate dehydrogenase from2 clostridium perfringens complexed with imp and a110
c3wgcB_ lyase Chain: B: l-allo-threonine aldolase; aeromonas jandaei l-allo-threonine aldolase h128y/s292r double mutant
c4qlbD_ transferase Chain: D: probable glycogen [starch] synthase; structural basis for the recruitment of glycogen synthase by2 glycogenin
c4cr8D_ oxidoreductase Chain: D: n-acylmannosamine 1-dehydrogenase; crystal structure of the n-acetyl-d-mannosamine dehydrogenase2 with nad
c4qpbB_ hydrolase Chain: B: lysostaphin; catalytic domain of the antimicrobial peptidase lysostaphin from2 staphylococcus simulans crystallized in the absence of phosphate
c4tnkl_ electron transport,photosynthesis Chain: L: photosystem ii reaction center protein l; rt xfel structure of photosystem ii 250 microsec after the third2 illumination at 5.2 a resolution
c4qlbH_ transferase Chain: H: protein gyg-1, isoform b; structural basis for the recruitment of glycogen synthase by2 glycogenin
c4nclB_ translation Chain: B: eukaryotic translation initiation factor 5b-like protein; crystal structure of eukaryotic translation initiation factor eif5b2 (517-970) from chaetomium thermophilum in complex with gdp
c4tnht_ electron transport,photosynthesis Chain: T: photosystem ii reaction center protein t; rt xfel structure of photosystem ii in the dark state at 4.9 a2 resolution
c4tnil_ electron transport,photosynthesis Chain: L: photosystem ii reaction center protein l; rt xfel structure of photosystem ii 500 ms after the third2 illumination at 4.6 a resolution
c4ng0C_ cell adhesion Chain: C: lar_0958 cell surface adhesin; lar_0958 a cell surface adhesin from lactobacillus reuteri
c4m0xB_ isomerase Chain: B: chloromuconate cycloisomerase; crystal structure of 2-chloromuconate cycloisomerase from rhodococcus2 opacus 1cp
c4qnyB_ transferase Chain: B: mitogen activated protein kinase, putative; crystal structure of mapk from leishmania donovani, ldbpk_331470
c4n3gA_ translation Chain: A: eukaryotic translation initiation factor 5b-like protein, crystal structure of eukaryotic translation initiation factor eif5b2 (870-1116) from chaetomium thermophilum, domains iii and iv
c4qe0B_ structural genomics, unknown function Chain: B: hypothetical protein; crystal structure of a hypothetical protein (bacuni_01052) from2 bacteroides uniformis atcc 8492 at 1.85 a resolution
c4cvuA_ hydrolase Chain: A: beta-mannosidase; structure of fungal beta-mannosidase from glycoside2 hydrolase family 2 of trichoderma hazianum
c4ozqA_ motor protein Chain: A: chimera of maltose-binding periplasmic protein and kinesin crystal structure of the mouse kif14 motor domain
c4cabA_ oxidoreductase Chain: A: catalase; the refined structure of catalase dr1998 from deinococcus2 radiodurans at 2.6 a resolution
c4oydB_ viral protein/inhibitor Chain: B: computationally designed inhibitor; crystal structure of a computationally designed inhibitor of an2 epstein-barr viral bcl-2 protein
c4tnky_ electron transport,photosynthesis Chain: Y: photosystem ii reaction center protein y; rt xfel structure of photosystem ii 250 microsec after the third2 illumination at 5.2 a resolution
c4p0tA_ cell cycle Chain: A: centromere protein m; crystal structure of human centromere protein m
c2maeA_ signaling protein Chain: A: tumor-associated calcium signal transducer 2; transmembrane-cytosolic part of trop2 explored by nmr and molecular2 dynamics
c4tniT_ electron transport,photosynthesis Chain: T: photosystem ii reaction center protein t; rt xfel structure of photosystem ii 500 ms after the third2 illumination at 4.6 a resolution
c3we5A_ ligase Chain: A: ubiquitin conjugating enzyme; crystal structure of ubiquitin conjugating enzyme e2 ubca1 from2 agrocybe aegerita
c4lxcA_ hydrolase Chain: A: lysostaphin; the antimicrobial peptidase lysostaphin from staphylococcus simulans
c4tnhL_ electron transport,photosynthesis Chain: L: photosystem ii reaction center protein l; rt xfel structure of photosystem ii in the dark state at 4.9 a2 resolution
c4tniL_ electron transport,photosynthesis Chain: L: photosystem ii reaction center protein l; rt xfel structure of photosystem ii 500 ms after the third2 illumination at 4.6 a resolution
c4qmfC_ rna binding protein Chain: C: protein faf1; structure of the krr1 and faf1 complex from saccharomyces cerevisiae
c4cgrA_ transcription Chain: A: putative tetr-family transcriptional regulator; structure of regulator protein sco3201 from streptomyces coelicolor
c4tnkg_ electron transport,photosynthesis Chain: G: photosystem ii reaction center protein y; rt xfel structure of photosystem ii 250 microsec after the third2 illumination at 5.2 a resolution
c4tkoB_ membrane protein Chain: B: emra; structure of the periplasmic adaptor protein emra
c4tnkL_ electron transport,photosynthesis Chain: L: photosystem ii reaction center protein l; rt xfel structure of photosystem ii 250 microsec after the third2 illumination at 5.2 a resolution
c4cj9A_ transcription Chain: A: burrh; burrh dna-binding protein from burkholderia rhizoxinica in2 its apo form
c4tnjy_ electron transport,photosynthesis Chain: Y: photosystem ii reaction center protein y; rt xfel structure of photosystem ii 500 ms after the 2nd illumination2 (2f) at 4.5 a resolution
c4tniy_ electron transport,photosynthesis Chain: Y: photosystem ii reaction center protein y; rt xfel structure of photosystem ii 500 ms after the third2 illumination at 4.6 a resolution
c4tnhT_ electron transport,photosynthesis Chain: T: photosystem ii reaction center protein t; rt xfel structure of photosystem ii in the dark state at 4.9 a2 resolution
c4qmfB_ rna binding protein Chain: B: krr1 small subunit processome component; structure of the krr1 and faf1 complex from saccharomyces cerevisiae
c4tnkt_ electron transport,photosynthesis Chain: T: photosystem ii reaction center protein t; rt xfel structure of photosystem ii 250 microsec after the third2 illumination at 5.2 a resolution
c4tnhl_ electron transport,photosynthesis Chain: L: photosystem ii reaction center protein l; rt xfel structure of photosystem ii in the dark state at 4.9 a2 resolution
c4tskA_ oxidoreductase,isomerase Chain: A: ketol-acid reductoisomerase; ketol-acid reductoisomerase from alicyclobacillus acidocaldarius
c4tnit_ electron transport,photosynthesis Chain: T: photosystem ii reaction center protein t; rt xfel structure of photosystem ii 500 ms after the third2 illumination at 4.6 a resolution
c4tnjL_ electron transport,photosynthesis Chain: L: photosystem ii reaction center protein l; rt xfel structure of photosystem ii 500 ms after the 2nd illumination2 (2f) at 4.5 a resolution
c4pswB_ transferase Chain: B: histone acetyltransferase type b subunit 2; crystal structure of histone acetyltransferase complex
c4tnhy_ electron transport,photosynthesis Chain: Y: photosystem ii reaction center protein y; rt xfel structure of photosystem ii in the dark state at 4.9 a2 resolution
c4qlbG_ transferase Chain: G: protein gyg-1, isoform b; structural basis for the recruitment of glycogen synthase by2 glycogenin
c4qpnA_ transferase Chain: A: protein-lysine methyltransferase mettl21b; crystal structure of human methyltransferase-like protein 21b
c4tnig_ electron transport,photosynthesis Chain: G: photosystem ii reaction center protein y; rt xfel structure of photosystem ii 500 ms after the third2 illumination at 4.6 a resolution
c4n3nA_ translation Chain: A: eukaryotic translation initiation factor 5b-like protein, crystal structure of eukaryotic translation initiation factor eif5b2 (517-1116) from chaetomium thermophilum, apo form
c3wqoB_ unknown function Chain: B: uncharacterized protein mj1311; crystal structure of d-tagatose 3-epimerase-like protein
c4tnhg_ electron transport,photosynthesis Chain: G: photosystem ii reaction center protein y; rt xfel structure of photosystem ii in the dark state at 4.9 a2 resolution
c4qmfA_ rna binding protein Chain: A: protein faf1; structure of the krr1 and faf1 complex from saccharomyces cerevisiae
c4mnpA_ sugar binding protein Chain: A: n-acetylneuraminate-binding protein; structure of the sialic acid binding protein from fusobacterium2 nucleatum subsp. nucleatum atcc 25586
c4tnjg_ electron transport,photosynthesis Chain: G: photosystem ii reaction center protein y; rt xfel structure of photosystem ii 500 ms after the 2nd illumination2 (2f) at 4.5 a resolution
c4tnjt_ electron transport,photosynthesis Chain: T: photosystem ii reaction center protein t; rt xfel structure of photosystem ii 500 ms after the 2nd illumination2 (2f) at 4.5 a resolution
c4tnjT_ electron transport,photosynthesis Chain: T: photosystem ii reaction center protein t; rt xfel structure of photosystem ii 500 ms after the 2nd illumination2 (2f) at 4.5 a resolution
c4tnjl_ electron transport,photosynthesis Chain: L: photosystem ii reaction center protein l; rt xfel structure of photosystem ii 500 ms after the 2nd illumination2 (2f) at 4.5 a resolution
c4qmhA_ protein binding Chain: A: lp04448p; the xmap215 family drives microtubule polymerization using a2 structurally diverse tog array
c4tnkT_ electron transport,photosynthesis Chain: T: photosystem ii reaction center protein t; rt xfel structure of photosystem ii 250 microsec after the third2 illumination at 5.2 a resolution


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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