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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2014 Jun 28

Fold library idPDB HeaderMoleculeTitle
c4qkuC_ hydrolase Chain: C: hydrolase; crystal structure of a putative hydrolase from burkholderia2 cenocepacia
c4p74D_ ligase/ligase inhibitor Chain: D: phenylalanine--trna ligase alpha subunit; phers in complex with compound 3a
c4q2bA_ hydrolase Chain: A: endo-1,4-beta-d-glucanase; the crystal structure of an endo-1,4-d-glucanase from pseudomonas2 putida kt2440
c4q9nD_ oxidoreductase/oxidoreductase inhibitor Chain: D: enoyl-[acyl-carrier-protein] reductase [nadh]; crystal structure of chlamydia trachomatis enoyl-acp reductase (fabi)2 in complex with nadh and afn-1252
c4ochA_ hydrolase Chain: A: endonuclease muts2; apo structure of smr domain of muts2 from deinococcus radiodurans
c4cybI_ iron binding protein Chain: I: putative dna protection protein; dpsc from streptomyces coelicolor
c4parC_ dna binding protein/dna Chain: C: uncharacterized protein abasi; the 5-hydroxymethylcytosine-specific restriction enzyme abasi in a2 complex with product-like dna
c4oy2D_ transcription Chain: D: transcription initiation factor tfiid subunit 7; crystal structure of taf1-taf7, a tfiid subcomplex
c4p71B_ ligase Chain: B: phenylalanine--trna ligase beta subunit; apo phers from p. aeuriginosa
c4oylC_ hydrolase Chain: C: cutinase; humicola insolens cutinase in complex with mono-ethylphosphate
c4naeA_ transferase Chain: A: heptaprenylglyceryl phosphate synthase; pcrb from geobacillus kaustophilus, with bound g1p
c4izeA_ signaling protein Chain: A: interleukin-36 gamma; crystal structure of il-36gamma
c4pqiA_ transferase Chain: A: in2-1 family protein, glutathione transferase lambda3; crystal structure of glutathione transferase lambda3 from populus2 trichocarpa
c4mm1E_ transferase Chain: E: geranylgeranylglyceryl phosphate synthase; gggps from methanothermobacter thermautotrophicus
c4n4rC_ membrane protein Chain: C: lps-assembly protein lptd; structure basis of lipopolysaccharide biogenesis
c4q35B_ membrane protein Chain: B: lps-assembly lipoprotein lpte; structure of a membrane protein
c4lafB_ oxidoreductase Chain: B: nad(p)h dehydrogenase (quinone); crystal structure of pnpb complex with fmn
c3wgdD_ isomerase Chain: D: thioredoxin domain-containing protein 5; crystal structure of erp46 trx1
c4q9aA_ hydrolase Chain: A: tat pathway signal sequence domain protein; crystal structure of a putative gdsl-like lipase (parmer_00689) from2 parabacteroides merdae atcc 43184 at 2.86 a resolution
c4pz8A_ transferase/transcription Chain: A: mrna-capping enzyme subunit alpha; pce1 guanylyltransferase bound to spt5 ctd
c3wgeA_ isomerase Chain: A: thioredoxin domain-containing protein 5; crystal structure of erp46 trx2
c2mpnB_ membrane protein Chain: B: inner membrane protein ygap; 3d nmr structure of the transmembrane domain of the full-length inner2 membrane protein ygap from escherichia coli
c2ma0A_ unknown function Chain: A: predicted protein; nmr structural of uvi31+
c4q69B_ sugar binding protein Chain: B: putative lipoprotein; crystal structure of a susd homolog (bt2259) from bacteroides2 thetaiotaomicron vpi-5482 at 2.50 a resolution
c4perB_ hydrolase/hydrolase inhibitor Chain: B: angiogenin; structure of gallus gallus ribonuclease inhibitor complexed with2 gallus gallus ribonuclease i
c4jejA_ transferase Chain: A: geranylgeranylglyceryl phosphate synthase; gggps from flavobacterium johnsoniae
c4tqgA_ sugar binding protein Chain: A: putative dtdp-d-glucose 4 6-dehydratase; crystal structure of megavirus udp-glcnac 4,6-dehydratase, 5-epimerase2 mg534
c4l22A_ transferase Chain: A: phosphorylase; crystal structure of putative glycogen phosphorylase from2 streptococcus mutans
c4oy2C_ transcription Chain: C: transcription initiation factor tfiid subunit 1; crystal structure of taf1-taf7, a tfiid subcomplex
c2mezA_ rna binding protein Chain: A: multiprotein bridging factor (mbp-like); flexible anchoring of archaeal mbf1 on ribosomes suggests role as2 recruitment factor
c4perA_ hydrolase/hydrolase inhibitor Chain: A: ribonuclease inhibitor; structure of gallus gallus ribonuclease inhibitor complexed with2 gallus gallus ribonuclease i
c2mpnA_ membrane protein Chain: A: inner membrane protein ygap; 3d nmr structure of the transmembrane domain of the full-length inner2 membrane protein ygap from escherichia coli
c2mlhA_ membrane protein Chain: A: opacity protein opa60; nmr solution structure of opa60 from n. gonorrhoeae in fc-12 micelles
c4tkmA_ oxidoreductase Chain: A: nadh-dependent reductase for 4-deoxy-l-erythro-5- crystal structure of nadh-dependent reductase a1-r' complexed with nad
c2moiA_ membrane protein Chain: A: inner membrane protein ygap; 3d nmr structure of the cytoplasmic rhodanese domain of the inner2 membrane protein ygap from escherichia coli
c4cy9A_ iron-binding protein Chain: A: dpsa; dpsa14 from streptomyces coelicolor
c4upcA_ protein binding Chain: A: nicastrin; structure of a extracellular domain
c4ouaB_ oxidoreductase Chain: B: latent form of ppo4 tyrosinase; coexistent single-crystal structure of latent and active mushroom2 tyrosinase (abppo4) mediated by a hexatungstotellurate(vi)
c4m8bR_ transcription/dna Chain: R: yhr177w; fungal protein
c4q35A_ membrane protein Chain: A: lps-assembly protein lptd; structure of a membrane protein
c2mhkA_ protein binding Chain: A: penicillin-binding protein activator lpoa; e. coli lpoa n-terminal domain


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Lawrence Kelley, Michael Sternberg 
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