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 Protein Homology/analogY Recognition Engine V 2.0


New fold library entries added 2014 Mar 15

Fold library idPDB HeaderMoleculeTitle
c4cnbA_ structural protein Chain: A: proximal thread matrix protein 1; structure of proximal thread matrix protein 1 (ptmp1) from the2 mussel byssus - crystal form 2
c3wofB_ transferase/transcription Chain: B: putative uncharacterized protein; crystal structure of p23-45 gp39 (6-132) bound to thermus thermophilus2 rna polymerase beta-flap domain
c4oauC_ hydrolase/rna Chain: C: 2-5a-dependent ribonuclease; complete human rnase l in complex with biological activators.
c3wodG_ transferase/transcription Chain: G: putative uncharacterized protein; rna polymerase-gp39 complex
c2ml6A_ structural genomics, unknown function Chain: A: uncharacterized protein; nmr structure of hypothetical protein zp_02069618.1 from bacteroides2 uniformis atcc 8492
c4crhA_ protein-binding protein Chain: A: sh3kbp1-binding protein 1; crystal structure of the btb-t1 domain of human shkbp1
c4oc9N_ lyase Chain: N: putative o-acetylhomoserine (thiol)-lyase; 2.35 angstrom resolution crystal structure of putative o-2 acetylhomoserine (thiol)-lyase (mety) from campylobacter jejuni3 subsp. jejuni nctc 11168 with n'-pyridoxyl-lysine-5'-monophosphate at4 position 205
c4n8xB_ structural protein Chain: B: carbon dioxide concentrating mechanism protein; the structure of nostoc sp. pcc 7120 ccml
c4mafH_ transferase Chain: H: atp sulfurylase; soybean atp sulfurylase
c4olqD_ lyase Chain: D: enoyl-coa hydratase/isomerase family protein; crystal structure of a putative enoyl-coa hydratase/isomerase family2 protein from hyphomonas neptunium
c3wpzA_ hydrolase Chain: A: beta-fructofuranosidase; microbacterium saccharophilum k-1 beta-fructofuranosidase mutant2 t47s/s200t/f447p/f470y/p500s
c2m5wA_ rna binding protein Chain: A: lupus la protein; nmr solution structure of the la motif (n-terminal domain, ntd) of2 dictyostelium discoideum la protein
c4o7jB_ antibiotic resistance Chain: B: carg; crystal structure of carg
c2mlgA_ dna binding protein Chain: A: sulfolobus transcription factor 76 aminoacid protein, stf76 from the sulfolobus islandicus plasmid-virus pssvx
c3wj9A_ translation Chain: A: eukaryotic translation initiation factor 2a; crystal structure of the eukaryotic initiation factor
c4m7gA_ hydrolase Chain: A: trypsin-like protease; streptomyces erythraeus trypsin
c2ly7A_ transcription Chain: A: dna-directed rna polymerase subunit beta; b-flap domain of rna polymerase (b. subtilis)
c4pq8A_ de novo protein Chain: A: designed protein or465; crystal structure of engineered protein, northeast structural genomics2 consortium target or465
c4mhzA_ transferase Chain: A: glutaminyl cyclase, putative; crystal structure of apo-form glutaminyl cyclase from ixodes2 scapularis in complex with pbd150
c4gboB_ oxidoreductase Chain: B: e7; structure of t.fusca e7
c2maxA_ transferase Chain: A: dna-directed rna polymerase subunit alpha; nmr structure of the rna polymerase alpha subunit c-terminal domain2 from helicobacter pylori
c4netA_ hydrolase Chain: A: ampc; crystal structure of adc-1 beta-lactamase
c2m59B_ transferase Chain: B: vascular endothelial growth factor receptor 2; spatial structure of dimeric vegfr2 membrane domain in dpc micelles
c3wbhB_ hydrolase Chain: B: alkaline phosphatase; structural characteristics of alkaline phosphatase from a moderately2 halophilic bacteria halomonas sp.593
c3zpeA_ viral protein Chain: A: fiber; structure of the carboxy-terminal domain of the turkey type 32 siadenovirus fibre
c4ofqA_ cell adhesion Chain: A: putative cell surface protein; structure of the c-terminal domain of the streptococcus pyogenes2 antigen i/ii-family protein aspa
c4jisB_ transferase Chain: B: ribitol-5-phosphate cytidylyltransferase; crystal structure of ribitol 5-phosphate cytidylyltransferase (tari)2 from bacillus subtilis
c4lqeA_ dna binding protein Chain: A: mepb; crystal structure of mepb
c2m59A_ transferase Chain: A: vascular endothelial growth factor receptor 2; spatial structure of dimeric vegfr2 membrane domain in dpc micelles
c3wodF_ transferase/transcription Chain: F: rna polymerase sigma factor; rna polymerase-gp39 complex
c4om9A_ hydrolase Chain: A: serine protease pet; x-ray crystal structure of the passenger domain of plasmid encoded2 toxin, an autrotansporter enterotoxin from enteroaggregative3 escherichia coli (eaec)
c4m6fA_ hydrolase/dna Chain: A: dna-invertase; dimer of the g-segment invertase bound to a dna substrate
c2mijA_ antimicrobial protein Chain: A: spbc2 prophage-derived bacteriocin sublancin-168; nmr structure of the s-linked glycopeptide sublancin 168
c4g97A_ signaling protein Chain: A: response regulator receiver; crystal structure of the response regulator phyr from brucella abortus
c4crsA_ transferase Chain: A: serine/threonine-protein kinase n2; human protein kinase n2 (pkn2, prkcl2) in complex with atpgammas
c4o9lA_ antiviral protein Chain: A: mitochondrial antiviral signaling protein (mavs); crystal structure of horse mavs card domain mutant e26r
c4cr1U_ structure Chain: U: 30s ribosomal protein thx; thermus thermophilus ribosome
c4oq2A_ hydrolase Chain: A: restriction endonuclease pvurts1 i; 5hmc specific restriction endonuclease pvurts1i
c4ovdA_ transferase Chain: A: peptidoglycan glycosyltransferase; crystal structure of a putative peptidoglycan glycosyltransferase from2 atopobium parvulum dsm 20469

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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