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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2013 Jan 14

Fold library idPDB HeaderMoleculeTitle
c3usaG_ immune system Chain: G: hla class ii histocompatibility antigen, do alpha chain; mhc class ii homolog structure
c4b7cB_ oxidoreductase Chain: B: probable oxidoreductase; crystal structure of hypothetical protein pa1648 from2 pseudomonas aeruginosa.
c4b3kA_ hydrolase Chain: A: beta-glucosidase; family 1 6-phospho-beta-d glycosidase from streptococcus pyogenes
c4i1vB_ transferase Chain: B: dephospho-coa kinase; crystal structure of a dephospho-coa kinase from burkholderia2 vietnamiensis bound to adp
c4dx94_ protein binding Chain: 4: integrin beta-1-binding protein 1; icap1 in complex with integrin beta 1 cytoplasmic tail
c3uwaA_ hydrolase Chain: A: riia-riib membrane-associated protein; crystal structure of a probable peptide deformylase from synechococcus2 phage s-ssm7
c4iiuB_ oxidoreductase Chain: B: 3-oxoacyl-[acyl-carrier protein] reductase; crystal structure of a putative 3-oxoacyl-[acyl-carrier2 protein]reductase from escherichia coli strain cft073 complexed with3 nadp+ at 2.1 a resolution
c4dx8H_ protein binding Chain: H: krev interaction trapped protein 1; icap1 in complex with krit1 n-terminus
c4b0fE_ immune system Chain: E: c4b-binding protein alpha chain; heptameric core complex structure of c4b-binding (c4bp)2 protein from human
c4exaD_ oxidoreductase Chain: D: putative uncharacterized protein; crystal structure of the pa4992, the putative aldo-keto reductase from2 pseudomona aeruginosa
c4hyzA_ structural genomics, unknown function Chain: A: uncharacterized protein; crystal structure of a hypothetical protein (rumgna_01855) from2 ruminococcus gnavus atcc 29149 at 2.25 a resolution
c4gouA_ signaling protein Chain: A: ehrgs-rhogef; crystal structure of an rgs-rhogef from entamoeba histolytica
c4ijkD_ oxidoreductase Chain: D: 3-ketoacyl-acyl carrier protein reductase (fabg); crystal structure of a putative 3-oxoacyl-[acyl-carrier2 protein]reductase from helicobacter pylori 26695
c4dczB_ unknown function Chain: B: dnaj-like protein mg200; crystal structure of a domain from a mycoplasma genitalium terminal2 organelle protein
c4adjB_ viral protein Chain: B: e1 envelope glycoprotein; crystal structure of the rubella virus glycoprotein e1 in its2 post-fusion form crystallized in presence of 1mm of calcium acetate
c2ynsA_ transport protein Chain: A: importin subunit alpha-1a; rimp_alpha_b54nls
c4i3rG_ viral protein/immune system Chain: G: outer domain of hiv-1 gp120 (ker2018 od4.2.2); crystal structure of the outer domain of hiv-1 gp120 in complex with2 vrc-pg04 space group p3221
c3ve9B_ lyase Chain: B: orotidine-5'-phosphate decarboxylase; crystal structure of orotidine 5'-monophosphate decarboxylase from2 metallosphaera sedula
c4aorE_ hydrolase/inhibitor Chain: E: trypsin inhibitor 3; cationic trypsin in complex with the spinacia oleracea2 trypsin inhibitor iii (soti-iii)
c4b24A_ hydrolase/dna Chain: A: probable dna-3-methyladenine glycosylase 2; unprecedented sculpting of dna at abasic sites by dna glycoslase2 homolog mag2
c2lm0A_ nuclear protein Chain: A: af4/fmr2 family member 1/protein af-9 chimera; solution structure of the af4-af9 complex
c4aorF_ hydrolase/inhibitor Chain: F: trypsin inhibitor 3; cationic trypsin in complex with the spinacia oleracea2 trypsin inhibitor iii (soti-iii)
c4acvA_ immune system Chain: A: prophage lambdalm01, antigen b; listeria monocytogenes antigen b
c4ah6B_ ligase Chain: B: aspartate--trna ligase, mitochondrial; human mitochondrial aspartyl-trna synthetase
c4etrA_ unknown function Chain: A: putative uncharacterized protein; x-ray structure of pa2169 from pseudomonas aeruginosa
c2m0pA_ lipid binding protein Chain: A: low-density lipoprotein receptor-related protein 2; solution structure of the tenth complement type repeat of human2 megalin
c2lq4p_ de novo protein Chain: P: structural characterization of an lpa1 first extracellular loop2 mimetic with a self-assembling coiled-coil folding constraint
c4gl2A_ rna binding protein/rna Chain: A: interferon-induced helicase c domain-containing protein 1; structural basis for dsrna duplex backbone recognition by mda5
c4avrA_ unknown function Chain: A: pa4485; crystal structure of the hypothetical protein pa4485 from2 pseudomonas aeruginosa
c4avfD_ oxidoreductase Chain: D: inosine-5'-monophosphate dehydrogenase; crystal structure of pseudomonas aeruginosa inosine 5'-2 monophosphate dehydrogenase
c3w14I_ hormone/hormone receptor/immune system Chain: I: insulin a chain; insulin receptor ectodomain construct comprising domains l1,cr,l2,2 fniii-1 and alphact peptide in complex with bovine insulin and fab3 83-14
c4es6A_ lyase Chain: A: uroporphyrinogen-iii synthase; crystal structure of hemd (pa5259) from pseudomonas aeruginosa (pao1)2 at 2.22 a resolution
c3zbdB_ viral protein Chain: B: non-structural protein 1; structure of tgev nsp1
c3w14A_ hormone/hormone receptor/immune system Chain: A: insulin a chain; insulin receptor ectodomain construct comprising domains l1,cr,l2,2 fniii-1 and alphact peptide in complex with bovine insulin and fab3 83-14
c4b4yA_ transport protein Chain: A: neuroglobin; crystal structure of the neuroglobin from the photosymbiotic2 marine acoel symsagittifera roscoffensis


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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