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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8h97A_

Fold library idPDB HeaderMoleculeTitle
c8h97A_2.19PDB header: hydrolaseChain: A: PDB Molecule: beta-agarase;


Added to library: Sat Feb 25 08:51:58 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SQAKVSVNLNVKHVVGGISEFDRTKYITIHANQIENEWDGDNFTSDLRDHFLNGFDVYLGRDTGGITWNL
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Known secondary structure (DSSP)
TTB
B

SS

TTSGGGSSSBSSS
TTTT


 .........80.........90.........100.........110.........120.........130.........140
Sequence NNMQEDASRPGFANPSNIISKGINTRNNYASKTHLHVYENRKSNHVVAAQLHPFWTGESQIATKGTGWEL
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Known secondary structure (DSSP) T

B
TTSTTSB

GGGGGGGGG
TT


STTT

STT



TTT



 .........150.........160.........170.........180.........190.........200.........210
Sequence ASPTATGEYMGRYFNEFYGGNGEPVPSWIEVINEPAYEALGGKKNFTNSLQEIADFHVEVADAIRVQNPN
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Known secondary structure (DSSP)
SSSSTTS



SSSSSSTT
TT

SS


TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LKIGGYTAAFPDFETGDFQRWINRDKLFIDVAGEKMDFWSWHLYDFPVIGGKEDIRSGSNVEATFDMHDH
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Known secondary structure (DSSP) SS



STTTTTGGG
STT

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence YSMLKLGHKKPYVISEYGAQTHDFRNEGWSSYRDWLFVRAQNSLMMSFMERPEDIAMAIPFTIVKAEWGF
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Known secondary structure (DSSP) SS




GGGTTS


T
GGG

BS

GGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence NTDKNLPYPARLMRKANEPESYTGEWVYTDRVKFYDLWKNVKGTRIDTKSTDLDIQVDAYVDGNKGYLIL
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Known secondary structure (DSSP) BTTTTB

SSBSTTTTT
S
S

TTTT

SSSTTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence NNLESEETEITLDVFEKYDSSITNILKRHLTLSSNNVVIEEETFSSSISTVQLGAGSTMILEYTFANSLT
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Known secondary structure (DSSP)
SSS

TT


TTSS



TT
SS


 .........500.........510.........520.........530.........540.........550.........560
Sequence IDETSTEEKYYADSYLQPIVASQPILFAVNNVVKSATYGEAVLRLGLGRDHGKSLKPIVKVNNTEVVVPD
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Known secondary structure (DSSP)


S



BTTB






SS
TTS
S

TT


S
 .........570.........580.........590.........600.........610.........
Sequence DWRGYDQADKGRFFGTIEIPVSYDLLTTNNTVSVEFPDSSGHVSSVIMQVFNFSSDIRT
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Known secondary structure (DSSP) S
SS


TTSSSTTT

SS
SS
SSSS
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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