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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8e9gD_

Fold library idPDB HeaderMoleculeTitle
c8e9gD_2.60PDB header: membrane proteinChain: D: PDB Molecule: nadh-quinone oxidoreductase subunit d;


Added to library: Sat Oct 15 10:32:55 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AGERIVVNMGPQHPSTHGVLRLILEIEGEIITEARCGIGYLHTGIEKNLEYRNWTQGVTFVTRMDYLSPF
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Known secondary structure (DSSP)

S


SSSTTTTTT
TT

TT


TTS
TTTTTSSTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FNETAYCLGVEKLLGITDDIPERASVIRVMLMELNRISSHLVALATGGMELGAMSAMFYGFREREEILRV
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Known secondary structure (DSSP) T
GGGS
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence FESITGLRMNHAYIRPGGLAADLPDDAITQVRRLVEILPKRLKDLEDLLNENYIWKARTVGVGYLDLTGC
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Known secondary structure (DSSP) S
SSS


TTSS


TTTT
TT
S


 .........220.........230.........240.........250.........260.........270.........280
Sequence MALGITGPILRSTGLPHDLRKAQPYCGYENYEFDVITDDRCDSYGRYIIRVKEMHESVKIVEQCLARLKP
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Known secondary structure (DSSP) T

TTTT



TTTSS

TTGGGS






S

S

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence GPVMISDKKLAWPADLKLGPDGLGNSPEHIAKIMGRSMEGLIHHFKLVTEGIRVPPGQVYVAVESPRGEL
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Known secondary structure (DSSP)

SB
S
TTTS



TT
T
T




STT
 .........360.........370.........380.........390.........400......
Sequence GVHMVSDGGTRPYRVHYRDPSFTNLQAVAATCEGGMVADAIAAVASIDPVMGGVDR
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Known secondary structure (DSSP)
SSSS
S
GGGTTSB




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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