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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8dhlA_

Fold library idPDB HeaderMoleculeTitle
c8dhlA_2.30PDB header: hydrolaseChain: A: PDB Molecule: glycosyl hydrolase family 2, sugar binding domain protein;


Added to library: Sat May 20 09:29:19 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GGRCQIAFNSGWLFSKNEANAVLPDRTTAGWQAVQLPHTWNDKDVGYYRGVGWYKKRFRLVPEKGKRYFL
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Known secondary structure (DSSP)




SSSS
S


S




TT

SS

TTSS





S



TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence RFEGVNQTAEVFVNGKPAGEHTGGYTAFNVDLTPFLEASGEQYIAVKADNSHRDDVPPLSADFTFFGGIY
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Known secondary structure (DSSP) S

BSTT
SSS

GGG

TTS
S

TTSS
SS
SB



B

 .........150.........160.........170.........180.........190.........200.........210
Sequence RPVHLITTGEQHFSMSDYGGPGIYITTPRVTPHGADVTITYHLQNCSDAPQALTLETVIRKDVASALATK
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Known secondary structure (DSSP) S
S
S
STTS
S
SS

SSS
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence NTAVTISAFGDTVVTVTCSDVRNFDLWSPDHPAMYYVESLLKQSGKRVDNLSQPLGFRWFRFDPEKGFFI
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Known secondary structure (DSSP)
TT

S


B
SSSB

TT



TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence NGKNIKLMGANRHQDRIPYGNALSNDMHRQDLSLLKEMGGNFLRNAHYPQADEVLDQADRLGFAVWEEIP
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Known secondary structure (DSSP) TT


S

TTSTT


TT


TTS


T


 .........360.........370.........380.........390.........400.........410.........420
Sequence LVNEVTVGPRHTENTTVMLKEMIKQHYNHPSVVIWAYMNEIYWAHRYKPQEEIAGRNRATLELARRLEHI
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Known secondary structure (DSSP)
BS



STT
TTSTTGGGGGS
GGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence VRELDPYRYTAMAMHNDPAYEETGLGDIPMIAGWNLYHGWYYGIYEDFGTFMDEQRRKYPKRIHLISEYG
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Known secondary structure (DSSP)
TTSS
TTGGGSSS

BTTTBS
TT
TTS

 .........500.........510.........520.........530.........540.........550.........560
Sequence AGSDVRLYSEKPEKFDFTVEEQTRFTRSITTQILDRPYIAGGALWNLADFSSENNKGLVTADRKPKDAYY
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Known secondary structure (DSSP)



TT
SS

TT


T
TTS
SB


B




SB
TT

B
 .........570.........580.........590.........600.........610.........620.........630
Sequence LMQALLSEKPVARLGYPFRNRWVHAATSPSDTLVPVRMHAFSNQKSVSLYVDNRLFGEAEVKDGMAEWEM
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Known secondary structure (DSSP)
SS

S
TT


SSTT


SSSTT
BTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence KLIPGRHLLSLAPNSPDTPEKQIDVRLIPFRPDGKLAMNVGANYAFIDTRTDLYWLPERTYEKGSWGVVG
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Known secondary structure (DSSP)
SSSTT
SS



SS




TT
SSTTTTB


B

TTSS
 .........710.........720.........730.........740.........750.........760.........770
Sequence GEPLYVGGKVGTKEDILAVDEEDPLYQTMRVNPEGFGADLPDGTYEIELLMVDYVITYEPGQRVFGVSVN
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Known secondary structure (DSSP)

TTB

S

TT
STTS
S




S







TTSST
 .........780.........790.........800.........810.........820.......
Sequence GTSILPEIDLGGSYGLNVPCRLTFRYTVTDNAGLSIKFHPVSGEPVLSAVRIRKVEF
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Known secondary structure (DSSP) TT
TT


TT

S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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