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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8azbA_

Fold library idPDB HeaderMoleculeTitle
c8azbA_1.40PDB header: transport proteinChain: A: PDB Molecule: dipeptide-binding protein dppe;


Added to library: Sat Feb 25 09:38:33 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EKVLYVNNENEPTSFDPPIGFNNVSWQPLNNIMEGLTRLGKDHEPEPAMAEKWSVSKDNKTYTFTIRENA
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Known secondary structure (DSSP)



S

S

STTT

S


S
TTS
SS
TTS

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KWTNGDPVTAGDFEYAWKRMLDPKKGASSAFLGYFIEGGEAYNSGKGKKDDVKVTAKDDRTLEVTLEAPQ
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Known secondary structure (DSSP) B
TTS
B


TTT

TTGGGGGGBTTTSS
GGGSSTTBSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence KYFLSVVSNPAYFPVNEKVDKDNPKWFAESDTFVGNGPFKLTEWKHDDSITMEKSDTYWDKDTVKLDKVK
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Known secondary structure (DSSP) TTTTSGGG




TTGGGSGGG



SSTTT
TT
TTGGG


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence WAMVSDRNTDYQMFQSGELDTAYVPAELSDQLLDQDNVNIVDQAGLYFYRFNVNMEPFQNENIRKAFAMA
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Known secondary structure (DSSP)



TS
S


STTTTSTT
TTSTTTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VDQEEIVKYVTKNNEKPAHAFVSPGFTQPDGKDFREAGGDLIKPNESKAKQLLEKGMKEENYNKLPAITL
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Known secondary structure (DSSP)

TT
S


SSSS
S

B
TTS
B

SS


T
SS


 .........360.........370.........380.........390.........400.........410.........420
Sequence TYSTKPEHKKIAEAIQQKLKNSLGVDVKLANMEWNVFLEDQKALKFQFSQSSFLPDYADPISFLEAFQTG
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Known secondary structure (DSSP) S




TT

S

SSSSTGGGSTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence NSMNRTGWANKEYDQLIKQAKNEADEKTRFSLMHQAEELLINEAPIIPVYFYNQVHLQNEQVKGIVRHPV
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Known secondary structure (DSSP)
TTT
S



T



S
TT

B

SS
 .........500.
Sequence GYIDLKWADKN
Predicted secondary structure



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Known secondary structure (DSSP) S

B
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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