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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7yz4A_

Fold library idPDB HeaderMoleculeTitle
c7yz4A_3.84PDB header: rna binding proteinChain: A: PDB Molecule: endoribonuclease dicer;


Added to library: Sat Nov 19 17:24:22 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLNPHAKRTVFLVNSANQVAQQVSAVRT
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Known secondary structure (DSSP)
S

SST

SSGGG

SSSSTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence HSDLKVGEYSDLEVNASWTKERWSQEFTKHQVLIMTCYVALTVLKNGYLSLSDINLLVFDECHLAILDHP
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Known secondary structure (DSSP)
S



T

T
STSS
TTTTTGGGGGTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence YREIMKLCESCPSCPRILGLTASILNGKCDPEELEEKIQKLERILRSDAETAPCEIVVDCGPFTDRSGLY
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Known secondary structure (DSSP) TSSS





SSSS

SSTS









SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ERLLMELEAALDFSKQILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKI
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Known secondary structure (DSSP)

S



 .........290.........300.........310.........320.........330.........340.........350
Sequence HALCEEYFSPASLDLKYVTPKVMKLLEILRKYIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITEF
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Known secondary structure (DSSP) GGGGS

SSS

SSSS


SS
TT
TT




 .........360.........370.........380.........390.........400.........410.........420
Sequence RKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVMLADTDK
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Known secondary structure (DSSP) TTTSSGGGGSS





S

SS

SST


TT
TTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence IKSFEEDLKTYKAIEKILRNKCSPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTREL
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Known secondary structure (DSSP)




S
SSSSS



GGGS


TT




B


B

 .........500.........510.........520.........530.........540.........550.........560
Sequence PDGTFYSTLYLPINSPLRASIVGPPMDSVRLAERVVALICCEKLHKIGELDEHLMRPGSTKRRQCYPKAI
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Known secondary structure (DSSP) TTS
BB
B

TTSS

S



BSSTSS
TT


TT
SS



 .........570.........580.........590.........600.........610.........620.........630
Sequence PECLRESYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSG
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Known secondary structure (DSSP)
TTSBT



TTS





GGG
TT





SSS
SSS






TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence EVTISIELKKSGFTLSQQMLELITRLHQYIFSHILRLEKPALEFKPTGAESAYCVLPLNVVLDIDFKFME
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Known secondary structure (DSSP) S



TTTTS



TT
TTTSSB




B

 .........710.........720.........730.........740.........750.........760.........770
Sequence DIEKSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETF
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Known secondary structure (DSSP)
TTSSS






SSS




GGGGSS
SSSSTTS


TT

TTSB
SSTT
SB
 .........780.........790.........800.........810.........820.........830.........840
Sequence AEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRLVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTA
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Known secondary structure (DSSP) T



S











SS



GGG
SS
T
 .........850.........860.........870.........880.........890.........900.........910
Sequence EELRAQTASLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKK
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Known secondary structure (DSSP)




B
GGG

S

S
TTS
 .........920.........930.........940.........950.........960.........970.........980
Sequence VSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNDLHTEQCIADKSIADCVAALLGCYLTSCGERA
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Known secondary structure (DSSP) SSTTGGGG
B
S


TTTT


TT

TTTT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence AQLFLCSLGLKVLPAEKTLNHLISGFETFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDA
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Known secondary structure (DSSP) T





TT
TTTT


SSTS

TT
TT

SS

S
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence ILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKI
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Known secondary structure (DSSP) T
TT


T
TTGGGG






 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence EVPKAMGDIFASLAGAIYMDSGMSLEVVWQVYYPMMQPLIEKFSANVPRSPVRELLEMEPETAKFSPAER
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Known secondary structure (DSSP)


TTTS
SS



STTT


 .........1200.........1210.........1220.........1230....
Sequence TYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQ
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Known secondary structure (DSSP)
TTS
TTTSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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