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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7uy7E_

Fold library idPDB HeaderMoleculeTitle
c7uy7E_4.20PDB header: replicationChain: E: PDB Molecule: dna polymerase;


Added to library: Sat Jul 16 08:55:06 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VKKINDYKNEDGSVDAYLYDYFYDAQVKPDKIYAFAKVQNKQTNAFDTCVIQIDTIIRNLFFYPSSDTVT
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Known secondary structure (DSSP)


GGGSS
TT

B




TTT
TT
TTT

S
B

B


BS
TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence EQQIKNEIAELLKKEQTSRKNVEFLGAFVDKNYAFELPIPRGKSRWYQVVMSYEYEVISPDTKGQYFSYS
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Known secondary structure (DSSP) SSS








SSSSS
SB

BTTS



TT


SSB


 .........150.........160.........170.........180.........190.........200.........210
Sequence TYSALETFLITKKITGPSWVRFQNVKDTTSCITNRKLEFRVDYTNQSNIQVLQKQLPTPPLSVVCISLKT
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Known secondary structure (DSSP)


T

SSB
S
B

SS

BSSS

STT
TT


S







 .........220.........230.........240.........250.........260.........270.........280
Sequence SQQIVLSQKKKEYKKEIFNLNMKYHEGINIDNSNKDELNQFKSISFITHIDPTKKQDSITKKGTLPETTK
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Known secondary structure (DSSP) TTS


SSS

GGGGGG


SSTTTGGGTTSSSS


SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence FCLNELNLLEQFLVHFNEIDPDIVVAHDLYSTVFEIILTRIREKGIRKWNLLSKLINIGSSDIPKYGSST
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Known secondary structure (DSSP)
SS

SSSTTTTTTGGGT
TTSSB
SSS

S


SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence FKTKMAMKGRLLVDTLLSSQEFVNCVEYTLEALAQKLFKIEIPRIDAKAYQQKFATYKLLNSLVDDTYQD
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Known secondary structure (DSSP) STTS


S

ST







GGGTGGGGSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence IDYALRIMYHLQIVPLTKQLTSICGNIWMGSLQNQRAERNEMLLLHKFNQLNYVYPDNFKNLPESYKKKH
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Known secondary structure (DSSP) T


T
TT



TT


 .........500.........510.........520.........530.........540.........550.........560
Sequence KNAQIRKQYEEDKGLYNEYIVLLDFNSLYPSIIQEFNVCFTTCVRDPIPLEMQMAPFLGNKIAPLPSILQ
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Known secondary structure (DSSP)



S


S
T
STTT






STGGGT



 .........570.........580.........590.........600.........610.........620.........630
Sequence YLVEQRKVVKNQIKGQKDPQVIETLDIKQKAFKLVANSMYGCLGFSSSRFYAMPLASFITAKGRHILFDS
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Known secondary structure (DSSP) T


STT
TT

 .........640.........650.........660.........670.........680.........690.........700
Sequence KKIVEDMGYSVIYGDTDSLMIKPGTNEFLEAVKTGLSIKIKVNSKYKKLQLDIDGVFKNMLLLKKKKYAT
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Known secondary structure (DSSP) TT




TT
B

S
S

SSS



STT
 .........710.........720.........730.........740.........750.........760.........770
Sequence LKVANWEEVEKEIKGLSRDAGNKILEIILESKSSENMLDDIKKYLIQLNDDLQYYKRFQLFEPIKRMLEV
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Known secondary structure (DSSP)

SS
TT

B




S

STTTTTGGGGT

TTTTTTTSGGG
 .........780...
Sequence IEGINLQEIASIL
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Known secondary structure (DSSP)






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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