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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7pdsD_

Fold library idPDB HeaderMoleculeTitle
c7pdsD_3.14PDB header: replicationChain: D: PDB Molecule: similar to d. nodosus vape;


Added to library: Sat Jul 16 08:54:42 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NDWKSQLRRSATTQALKKTTTNAEIILCNDESLKGLVQYDAFEKVTKLKRLPYWRSKGDANYYWADIDTT
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Known secondary structure (DSSP)

GGGG

B
TTT

B


S
GGGSS
TTTTSS

TTS
TT



B

 .........80.........90.........100.........110.........120.........130.........140
Sequence HVISHIDKLYNVQFSRDLIDTVIEKEAYQNRFHPIKSMIESKSWDGIKRIETLFIDYLGAEDNHYNREVT
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Known secondary structure (DSSP) SS



T
TTS


S


STTS




 .........150.........160.........170.........180.........190.........200.........210
Sequence KKWMMGAVARIYQPGIKYDSMIILYGGQGVGKSTAVSKLGGHWYNQSIKTFKGDEVYKKLQGSWICEIEE
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Known secondary structure (DSSP)
TT






SSS
GGG




SSSSTTT
SGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence LSAFQKSTIEDIKGFISAIVDIYRASYGKRTERHPRQCVFVGTTNNYEFLKDQTGNRRFFPITTDKNKAT
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Known secondary structure (DSSP) GS

S

TT
SS





S

B

SS

SS

TT

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence KSPFDDLTPVVVQQMFAEARVYFDENPTDKALLLDKEASEMALKVQEAHSEKDALVGEIEEFLERPIPSD
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Known secondary structure (DSSP) S
TTTS

S
SS

TB


TTS
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence YWYRTLEEKRVSAHDVIDQDYIKLIELPNAKPGAYVWRDKVCSMEIWKVMMKRDDQPQQHHLRKIDKALR
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Known secondary structure (DSSP) GGGS
S









SSSTTS



TS


S


SS
 .........430.........440.........450....
Sequence NTNYCGTVKKQTRYGEGIGKQYGFSVDLASYYKN
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Known secondary structure (DSSP) SSSB
SS


TTT

B

T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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