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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7nz1D_

Fold library idPDB HeaderMoleculeTitle
c7nz1D_2.10PDB header: electron transportChain: D: PDB Molecule: nadh-quinone oxidoreductase subunit c/d;


Added to library: Sat Aug 21 08:30:30 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDE
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Known secondary structure (DSSP)
TTS
B

TTS
GGG

BBSSS

TTSTTSSS




 .........80.........90.........100.........110.........120.........130.........140
Sequence RLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGH
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Known secondary structure (DSSP) TT



TTS


STTTT
TT



TTT
TTS

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence PNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGDFMFLNLGPHGAF
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Known secondary structure (DSSP) SS


SSS
TT

S
TTSTTS


GGGS



SS



S
SSS











 .........220.........230.........240.........250.........260.........270.........280
Sequence RIVLQLIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNV
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Known secondary structure (DSSP)




TT


TTSSBTTTTTTS
TTTTT



 .........290.........300.........310.........320.........330.........340.........350
Sequence IRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRG
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Known secondary structure (DSSP) TS

SGGGGTSSSS



BTSS


TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence WDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYS
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Known secondary structure (DSSP) S
STTTTSS
B
T

TTTT



S

T
 .........430.........440.........450.........460.........470.........480.........490
Sequence GYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETL
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Known secondary structure (DSSP) TGGGS






SS
B
S


S
SB
SSTT
BS

TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence ITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLI
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Known secondary structure (DSSP) T




S

SSS

SSSB
S
TT

 .........570.....
Sequence VYLGSIDFVMSDVDR
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Known secondary structure (DSSP) S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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