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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7dkhE_

Fold library idPDB HeaderMoleculeTitle
c7dkhE_2.90PDB header: gene regulationChain: E: PDB Molecule: rna polymerase-associated protein ctr9;


Added to library: Sat Nov 27 11:02:01 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YPSXEWPTSLDIPLKASEELVGIDLETDLPDDPTDLKTLLVEENSEKEHWLTIALAYCNHGKTNEGIKLI
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Known secondary structure (DSSP)






S
SSSSSTTT
S
SSGGGGTT

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence EXALDVFQNSERASLHTFLTWAHLNLAKGQSLSVETKEHELTQAELNLKDAIGFDPTWIGNXLATVELYY
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Known secondary structure (DSSP) TTTS
GGGT
TT


TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QRGHYDKALETSDLFVKSIHAEDHRSGRQSKPNCLFLLLRAKLLYQKKNYXASLKIFQELLVINPVLQPD
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Known secondary structure (DSSP) TT
TTTTTT





TT

TT
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PRIGIGLCFWQLKDSKXAIKSWQRALQLNPKNTSASILVLLGEFRESFTNSTNDKTFKEAFTKALSDLNN
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Known secondary structure (DSSP) TT

TT
S

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence IFSENQHNPVLLTLLQTYYYFKGDYQTVLDIYHHRILKXSPXIAKIVLSESSFWCGRAHYALGDYRKSFI
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Known secondary structure (DSSP) TT
TT
TT
TTGGGGGGS
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence XFQESLKKNEDNLLAKLGLGQTQIKNNLLEESIITFENLYKTNESLQELNYILGXLYAGKAFDAKTAKNT
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Known secondary structure (DSSP)
TT
TT
TTTTT

SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence SAKEQSNLNEKALKYLERYLKLTLATKNQLVISRAYLVISQLYELQNQYKTSLDYLSKALEEXEFIKKEI
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Known secondary structure (DSSP)
SSSS


TT
TT


 .........500.........510.........520.........530.........540.........550.........560
Sequence PLEVLNNLACYHFINGDFIKADDLFKQAKAKVSDKDESVNITLEYNIARTNEKNDCEKSESIYSQVTSLH
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Known secondary structure (DSSP)
T
TS
TT
TTTT

 .........570.........580.........590.........600.........610.........620.........630
Sequence PAYIAARIRNLYLKFAQSKIEDSDXSTEXNKLLDLNKSDLEIRSFYGWYLKNSKERKNNEKSTTHNKETL
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Known secondary structure (DSSP) TT
TT
S
TT
TT

SS
SSTTS
 .........640.........650.........660.........670.........680.........690.........700
Sequence VKYNSHDAYALISLANLYVTIARDGKKSRNPKEQEKSKHSYLKAIQLYQKVLQVDPFNIFAAQGLAIIFA
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Known secondary structure (DSSP) T
S

TS

T
TT
 .........710.........720.........730.........740.........750.........760.........770
Sequence ESKRLGPALEILRKVRDSLDNEDVQLNLAHCYLEXREYGKAIENYELVLKKFDNEKTRPHILNLLGRAWY
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Known secondary structure (DSSP) TT
TT


TT
SS

TTT
 .........780.........790.........800.........810.........820.........830.........840
Sequence ARAIKERSVNFYQKALENAKTALDLFVKESSKSKFIHSVKFNIALLHFQIAETLRRSNPKFRTVQQIKDS
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Known secondary structure (DSSP) TTT
T

TS
GGG

 .........850.........860.........870.........880.........890.........900.........910
Sequence LEGLKEGLELFRELNDLKEFNXIPKEELEQRIQLGETTXKSALERSLNEQEEFEKEQSAKIDEARKILEE
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Known secondary structure (DSSP) STT

SS
SSTTT
 ...
Sequence NEL
Predicted secondary structure

SS confidence


Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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