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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6y3pA_

Fold library idPDB HeaderMoleculeTitle
c6y3pA_2.30PDB header: ligaseChain: A: PDB Molecule: klla0b12012p;


Added to library: Sat May 2 08:41:51 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PAQIVLTIPETEYIYGPLNRSFRKHLPNVPVSRSLPVTIDKLTFHYGDYEQLDMDQLMSNQLYHANSYIY
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Known secondary structure (DSSP)

S
TTSTT
TTS
SS

SS

S

GGGS

TTSS
SB
 .........80.........90.........100.........110.........120.........130.........140
Sequence RKAIIRKHYLSHTIHSYVVKNRESILNRAFLESFNIDVDYAEFLDDALDENWELRQELESKEKWWILKPS
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Known secondary structure (DSSP)
ST
TT
GGGTSB


SSGGGTTT

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence MSQGIRIFKTIEQLQAIFDSFEEQLRHFIVQEYLHNPLLLSEAHGRKFHIRCYVTCSGDLQVFVYDRMLA
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Known secondary structure (DSSP)



SS




SSB


TTTTT

TTTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LFAPNKFVPPTEEYDVLDIEQLACHLTNSVIEFDALKDIPSHRREEIRTQIHEAVSELFKAAVNVDRLNF
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Known secondary structure (DSSP)
SS





SS




GGG
TTS

SSS

 .........290.........300.........310.........320.........330.........340.........350
Sequence RPLKNSLETFGFDFLVDSDYQVKLLEVNAFPDFKQTGDDLKNLIDELFDDVVSICVRPMFNLPPLHHQHS
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Known secondary structure (DSSP) B

TTBBTTS
SS





STTGGGGT





SS
 .........360
Sequence KFVEVLKLKS
Predicted secondary structure

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Known secondary structure (DSSP) S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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