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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6xn7A_

Fold library idPDB HeaderMoleculeTitle
c6xn7A_3.47PDB header: rna binding protein/rnaChain: A: PDB Molecule: crispr-associated protein cas10;


Added to library: Sat Jan 15 08:40:17 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MDKINLVCGSLLHNIGKIIYRGTSERAKHSKLGGDFIKSFEQFRNTELTDCIRYHHAQEITSVKSNKEKN
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Known secondary structure (DSSP)

TT
SS

S
TSSS


S
STS
SSS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SLFYITYIADNISSGMDRRKDLEEGAEGFNWDKKVALGSVFNVLNEKEKGRQNYSYPFVAEPLNFPTATQ
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Known secondary structure (DSSP)
SS


TTS


TTSS
S


SS




TT




B










BSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NQYTTSYYDGLITDMKTILQRLKPDKEHINSLLQMMESLWSYVPSSTDKNQLVDISLYDHSRTTAAIASA
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Known secondary structure (DSSP)



TT

S
TTSGGGSBS

SSSGGGGSB
 .........220.........230.........240.........250.........260.........270.........280
Sequence IYDYFQAENITDYQKELFDYNATEFYDKNAFLMMNFDMSGVQNFIYNISGSKALKSLRARSFYLDMLLEY
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Known secondary structure (DSSP) T


TTTTTS

ST


STT
 .........290.........300.........310.........320.........330.........340.........350
Sequence ISDNLLEKLELSRANILYVGGGHAYLLLANTNKTKAILSDFEHDLKTWFLDKFKIDLYVAMAYTEVSAND
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Known secondary structure (DSSP) TT

TTS


SS



SSSSS
SST
 .........360.........370.........380.........390.........400.........410.........420
Sequence LMNHNGHYRDIYRRLSQKTSAKKANRYTAEEILNLNHQGTENARECRECKRSDLLIEEDDICEICDSLQK
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Known secondary structure (DSSP) TTTSSS
SS





SS



SSS






TTT


 .........430.........440.........450.........460.........470.........480.........490
Sequence VSRDLTRENIFVIANEGVLDMPFGKKMSALSYSQADKLKKSNAEVQIYAKNISEIGQNLMTRIDMGDYTY
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Known secondary structure (DSSP) TTS
SSSSSTTT




SS
SS
S

S









S
 .........500.........510.........520.........530.........540.........550.........560
Sequence RSDFHEMLEEVEVGINRLGVLRADVDNLGQAFINGIPDDYLSISRTATFSRAMSRFFKNYLNQLLAEKSY
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Known secondary structure (DSSP) SS
SS

SS




TSS
STT

TT
 .........570.........580.........590.........600.........610.........620.........630
Sequence KINVIYAGGDDLFMIGAWQDILDFSIVLKQKFADFTQNKLSISAGIGMFREKYPVARMASLTGDLEDAAK
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Known secondary structure (DSSP)



SSS


TTSS

TTS
 .........640.........650.........660.........670.........680.........690.........700
Sequence DYKPDERTKNAVTLFDATNVFSWDTLENDIFVKLDAITKNFEKLDETGKAFIYRLIDLLRGVNENQQINI
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Known secondary structure (DSSP) T


S




SSTT
TSSS
SSSTTTTTTTS
 .........710.........720.........730.........740......
Sequence ARLAYTLSRMEEKIGKTFAQELYNWANADRKTLIMALEIYILKTRE
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Known secondary structure (DSSP) S

T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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