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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6v1xB_

Fold library idPDB HeaderMoleculeTitle
c6v1xB_3.50PDB header: transport proteinChain: B: PDB Molecule: potassium channel kat1;


Added to library: Sat Jun 6 09:12:59 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HIISPFNPRYRAWEMWLVLLVIYSAWICPFQFAFITYKKDAIFIIDNIVNGFFAIDIILTFFVAYLDSHS
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Known secondary structure (DSSP)

B
TT
TS
SSS
TTTTSB
B

SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence YLLVDSPKKIAIRYLSTWFAFDVCSTAPFQPLSLLFNYELGFRILSMLRLWRLRRVSSLFARLEKDIRFN
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Known secondary structure (DSSP)
S
B
SSTTTS
ST

TGGGGGGGGSSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence YFWIRCTKLISVTLFAIHCAGCFNYLIADRYPNPRKTWIGAVYPNFKEASLWNRYVTALYWSITTLTTTG
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Known secondary structure (DSSP) SSSSSSSSTTTTT
SS
TTS
SS

 .........220.........230.........240.........250.........260.........270.........280
Sequence YGDFHAENPREMLFDIFFMMFNLGLTAYLIGNMTNLVVHWTSRTRTFRDSVRAASEFASRNQLPHDIQDQ
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Known secondary structure (DSSP)
SSS


STST

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence MLSHICLKFKTEGLKQQETLNNLPKAIRSSIANYLFFPIVHNIYLFQGVSRNFLFQLVSDIDAEYFPPKE
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Known secondary structure (DSSP) TTTS
SSTS
SS
SS

TTT
B


B
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence DIILQNEAPTDLYILVSGAVDFTVYVDGHDQFQGKAVIGETFGEVGVLYYRPQPFTVRTTELSQILRISR
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Known secondary structure (DSSP)
TT



B
BSSS




SS
SS




TT

B

GGGTS



SS
SS
B
B
B
 .........430.........440......
Sequence TSLMSAMHAHADDGRVIMNNLFMKLR
Predicted secondary structure
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Known secondary structure (DSSP) TTSS
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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